| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3066 |
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| Symbol | |
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| ID | 4253637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3664756 |
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| End bp | 3665277 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638119708 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_735194 |
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| Protein GI | 113971401 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0377442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAA TTCTGATCAT CTTCTCTAGT GTTCATGGTC AAACTCGCAA AATTACCAAT
CAATTGGCGC AGCAACTCAA GGAGTTGGGT AATTCTGTGG TGATTGCGGA TATTAAGGCT
GTTCCGGCGA TGGAATCCTT CGATAAGATC ATTATTGGCG CTAGTATTCG CCACGGAAAA
CATAATCCTG CGTTATACGA ATTTATCCAA AAGCATCAAA AGATCCTCTC GCAAAAGGTG
AGCGGGTTTT TCTCTGTGAG TCTAGTCGCT CGTAAACCAG AGAAAAACAC CCCAGAAACC
AATCCCTACA TGCAGGCGTT TTTAAGCAAA ACCACTTGGC GCCCAACGTT GTTGCAAGTG
TTTGGCGGTA ATCTGAATTA CCAAGGTTAT AATGCATTCG ATAGAAATAT TATCCGTTTT
ATCATGTGGT TAACTAAAGG CCCAACGGAC CCTGTCACCA ATGTGGAATA CACTGATTGG
CAAAAAGTGG ATGAATTCGG CCTACAGATC CATCAAGCCT GA
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| Protein sequence | MKKILIIFSS VHGQTRKITN QLAQQLKELG NSVVIADIKA VPAMESFDKI IIGASIRHGK
HNPALYEFIQ KHQKILSQKV SGFFSVSLVA RKPEKNTPET NPYMQAFLSK TTWRPTLLQV
FGGNLNYQGY NAFDRNIIRF IMWLTKGPTD PVTNVEYTDW QKVDEFGLQI HQA
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