Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3061 |
Symbol | |
ID | 4253632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3660213 |
End bp | 3660866 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638119703 |
Product | dihydropteridine reductase |
Protein accession | YP_735189 |
Protein GI | 113971396 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.201865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0102735 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATT TAAGTTTTCT CGCTAAAAAG CGTTACACCA CTAAGGCCTT TGATCCAACC AAGACAATTC CTGCCGACAA GATTGCCGAA ATCAAAACCT TACTGCAGTT CAGCCCATCA TCGACGAATT CGCAGCCTTG GCACTTTGTG CTAGCAAGCA CGACAGAAGG TAAAGCCTTG ATCGCAGAAT CGACCGAGAA CTACGCCTTT AATACTCAAA AAATTCTTAA TGCTTCCCAT GTGGTAGTGC TCTGTACTCG CACTCAACTC GATGAAGCCC ATTTACTGCA AGTGCTAGAG CAAGAAGCCA AAGATGGCCG TTTTGCCAAT GATGAAGCCA AGCAAGCTCA GCACAATGGC CGTTCCTTCT TTGCCAATAT GCACAAGAAT GAATTGAAAG ATGCTCAGCA TTGGATGGAA AAACAAGTCT ACTTAGCACT AGGCACATTG ATGTTAGGTG CGAGTGTGCT CGATATCGAT GCTTGCCCTA TCGAAGGTTT CGATGCGGTT AAACTCAATC AAGTCTTAGG CCTGCGCGAA AAAGGTTTCT GTGCTTCTGT CGTAGTCGCT CTAGGTTACC GCGCTGAAGA AGACTTCAAC GCTAAGTTAC CTAAGTCACG TTTAGCGCAA GAGATTATCT TTACCGAGAT CTAA
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Protein sequence | MSDLSFLAKK RYTTKAFDPT KTIPADKIAE IKTLLQFSPS STNSQPWHFV LASTTEGKAL IAESTENYAF NTQKILNASH VVVLCTRTQL DEAHLLQVLE QEAKDGRFAN DEAKQAQHNG RSFFANMHKN ELKDAQHWME KQVYLALGTL MLGASVLDID ACPIEGFDAV KLNQVLGLRE KGFCASVVVA LGYRAEEDFN AKLPKSRLAQ EIIFTEI
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