Gene Shewmr4_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3061 
Symbol 
ID4253632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3660213 
End bp3660866 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content45% 
IMG OID638119703 
Productdihydropteridine reductase 
Protein accessionYP_735189 
Protein GI113971396 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.201865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0102735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATT TAAGTTTTCT CGCTAAAAAG CGTTACACCA CTAAGGCCTT TGATCCAACC 
AAGACAATTC CTGCCGACAA GATTGCCGAA ATCAAAACCT TACTGCAGTT CAGCCCATCA
TCGACGAATT CGCAGCCTTG GCACTTTGTG CTAGCAAGCA CGACAGAAGG TAAAGCCTTG
ATCGCAGAAT CGACCGAGAA CTACGCCTTT AATACTCAAA AAATTCTTAA TGCTTCCCAT
GTGGTAGTGC TCTGTACTCG CACTCAACTC GATGAAGCCC ATTTACTGCA AGTGCTAGAG
CAAGAAGCCA AAGATGGCCG TTTTGCCAAT GATGAAGCCA AGCAAGCTCA GCACAATGGC
CGTTCCTTCT TTGCCAATAT GCACAAGAAT GAATTGAAAG ATGCTCAGCA TTGGATGGAA
AAACAAGTCT ACTTAGCACT AGGCACATTG ATGTTAGGTG CGAGTGTGCT CGATATCGAT
GCTTGCCCTA TCGAAGGTTT CGATGCGGTT AAACTCAATC AAGTCTTAGG CCTGCGCGAA
AAAGGTTTCT GTGCTTCTGT CGTAGTCGCT CTAGGTTACC GCGCTGAAGA AGACTTCAAC
GCTAAGTTAC CTAAGTCACG TTTAGCGCAA GAGATTATCT TTACCGAGAT CTAA
 
Protein sequence
MSDLSFLAKK RYTTKAFDPT KTIPADKIAE IKTLLQFSPS STNSQPWHFV LASTTEGKAL 
IAESTENYAF NTQKILNASH VVVLCTRTQL DEAHLLQVLE QEAKDGRFAN DEAKQAQHNG
RSFFANMHKN ELKDAQHWME KQVYLALGTL MLGASVLDID ACPIEGFDAV KLNQVLGLRE
KGFCASVVVA LGYRAEEDFN AKLPKSRLAQ EIIFTEI