| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3060 |
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| Symbol | |
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| ID | 4253631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3657863 |
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| End bp | 3659818 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638119702 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_735188 |
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| Protein GI | 113971395 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00600149 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.01476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAG TAACAACATT AGTTATAGCA GCGATGGTTT CTTCCGGGGT CAGTGCGGCA
GAGTCAAAAC CTGCTACTCA GGCAACGATA GACGCAAATA ACTCGGTCAA ACAATCCTTG
CCTTTTAGTG ATAAAAAAGA CTTTGAGAAC GCTCAGAAAG GTCTTATTGC GAAACAAGAT
GTCGTGACCA TTAAGAACGA ACAAGGAGAT GTCGTCTGGG ATCTAGAACA GTACAAAAAG
TATATCGACC TCAACAATCC TGCCCCTGAT AGTGTCAACC CAAGCCTGTG GCGTAACGCA
CAGCTGAACA TGATCAATGG TCTATTTGAA GTCACCGATG GTATCTATCA GGTCCGCGGC
TATGATCTCA GTAACATCAC TTTTATCAAA GGTAAAACGG GTTGGATTGT CTTTGATCCT
CTTATCTCCC AAGAAACGGC TAAAGCAGCC TTAGATTTTG TCAATGAAAA ACTCGGTAAG
CGTCCCGTCG TGGCTGTGGT TTATAGCCAT AGTCATATTG ACCATTTTGG TGGTGTACGC
GGCATTGTCG ATGAAAAGGA CGTTAAGGCC GGTAAGGTCA AAATTATCGC CTCGCATGGA
TTCACCGAGC ATGCGGTTTC TGAAAACGTC ATCGCCGGTA ATGCTATGGG ACGCCGTGCA
ATTTTCATGT ACGGCGCTTT ATTGCCTCGA AATGAATTTG GTGGTGTGAA CGGTGGTCTG
GGCCAAACCA CTTCAACAGG TTTAGCCACA CTCATCGAAC CTACGGATAT CATCGAGAAA
ACCGGCGATG AAATGACGGT TGATGGGGTC AAAATGGTTT TCCAATATAC GCCTGGCACC
GAAGCGCCAA CGGAAATGAA CACTTGGTTT CCAGATAAAA AGGCGCTGTG GATGGCCGAA
AACTCAACCA ATACCATGCA TAACATTCTG ACGTTGCGCG GCGCGCAAGT TCGCGACGCC
TTGAAATGGT CTGGTTATTT ACAGGATACC ATTGAGATGT GGGGAGGGGA CGTTAAGGTC
AAGTTCCAAA GCCACCATTG GCCGATTTGG GGAAATGCTG ACATTGTTGA GTACTTTAAG
AAGCAGCGTG ACATCTATAA ATATACCCAT GACCAAACAG TACGCTTAAT GAACCAGGGC
TACACGGGTG AAGAAATATC AGAAATCATT ACCTTGCCAA AATCATTAGA AAATAACTGG
AATACTCGCG GCTATTACGG AACGCTTCGC CATAACAGTC GTGCCGTCTA TCAACGCTAC
ATGGGTTGGT ACGATGGTAA TCCCTCAGAT CTGAACAATT TGCCACCTAC GGATGCCGCG
GTGAAATACG TTGAGTATAT GGGGGGGGAG AAAGCGGCAA TTGATAAAGC GCAGGCAGAC
TTCGATAAAG GTAACTATCG TTGGGTTGCC GAAGTGCTTA AGCATGTCGT CTTTGCGAAT
CCACAGAGTC AACAAGGCAA GGCACTGCTG GCAGATGCTT ACGAGCAGTT AGGTTATCAG
TCCGAATCGG GTCCTTGGCG CTCCGTCTAC CTGCAAGGTG CTTATGAGTT AAGAAATGGC
GCCCCTTCGG CTGGCGGAGT TCAGACTGCA TCGCCCGACA TTATCAAAAA TATGCCGCCT
GAGATGCTGT TTGATTATCT CGCGGTACGT ATTTTACCCG AAAAAGCAGA AGGTAAGAAT
TTTGCAATAA ATCTGAACTT TACAGATTTA AATGAGAAAT ACACCTTGTA TCTGGAGGAC
TCAGTACTCA TTCATACTAA GAAACAATCC GATAAACCAA ACGTGACGCT CACACTGAAA
AAATCAGTAT TGGATGACGT GCAGCTGGGT AATATCACCT TGGAAAAAGC GATTGCGAAT
GGGGATATTC AATTGAATGG GGATAAAGAA GTGTTCAAGG ATTTCGTTGG AATGCTGGAT
AACTTCAATT TCTGGTTCAA TATTGTCACT CCTTAG
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| Protein sequence | MKLVTTLVIA AMVSSGVSAA ESKPATQATI DANNSVKQSL PFSDKKDFEN AQKGLIAKQD
VVTIKNEQGD VVWDLEQYKK YIDLNNPAPD SVNPSLWRNA QLNMINGLFE VTDGIYQVRG
YDLSNITFIK GKTGWIVFDP LISQETAKAA LDFVNEKLGK RPVVAVVYSH SHIDHFGGVR
GIVDEKDVKA GKVKIIASHG FTEHAVSENV IAGNAMGRRA IFMYGALLPR NEFGGVNGGL
GQTTSTGLAT LIEPTDIIEK TGDEMTVDGV KMVFQYTPGT EAPTEMNTWF PDKKALWMAE
NSTNTMHNIL TLRGAQVRDA LKWSGYLQDT IEMWGGDVKV KFQSHHWPIW GNADIVEYFK
KQRDIYKYTH DQTVRLMNQG YTGEEISEII TLPKSLENNW NTRGYYGTLR HNSRAVYQRY
MGWYDGNPSD LNNLPPTDAA VKYVEYMGGE KAAIDKAQAD FDKGNYRWVA EVLKHVVFAN
PQSQQGKALL ADAYEQLGYQ SESGPWRSVY LQGAYELRNG APSAGGVQTA SPDIIKNMPP
EMLFDYLAVR ILPEKAEGKN FAINLNFTDL NEKYTLYLED SVLIHTKKQS DKPNVTLTLK
KSVLDDVQLG NITLEKAIAN GDIQLNGDKE VFKDFVGMLD NFNFWFNIVT P
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