| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3053 |
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| Symbol | |
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| ID | 4253624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3652609 |
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| End bp | 3653343 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119695 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_735181 |
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| Protein GI | 113971388 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000807518 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0316275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CCATGTTATT AGGCGGCCTA GCCCTCACTG CCACCTTGTT GTTAGCTGGA
TGTGGGAAAA GCAACGATGT TTTAGTGGTT GGCACCAATG CGGCCTTCCC GCCCTTTGAA
TATGTTGGCG GACAAAGTGG CGACGAAATC AAAGGCTTCG ATATTGAGCT TGCCAAACAA
ATCGCTAAAG ATGCCGGCAA GACGCTCAAA GTCGAAAACA TGAAATTCGA TTCACTGATC
GTAGCGCTAA ACTCAGGCAA GATTGATTTT ATCGCCTCGG GCATGACCAT CACCCCTGAG
CGCCAAGCCA GCGTTAACTT TTCGGAGCCC TATTACGAGG CGACTCAAGT GCTACTCGTG
AATAAAGATA ACGACACCAT TCATACCCTT GATGACATTA AAGACAAACA CTTTGCGGTG
CAGCTCGGCT CAACCGCCGA TATGATGTCT AAAAAATACA CCCAAAATGT CACCGCTTTT
AACACAGGCT TCGAAGCCAT TATGGAACTG AAGAATGGCA AAGTCGACTT AGTGCTATTC
GATAGCGAGC CTGCGGCGAA CTATCTGGCG AAAAACCCGG ATCTCAAACT GATCAAGCTG
GATTTCCCCC CAGAGTTTTA TGGCTTTGCG GTATCAAAGC AGCAGCCAGA ACTTCTCAAT
AGCATTAATA ACACGCTGAA AAACTTGAAA GAAAGCGGCC AATATCAGGC GCTCGTTTCA
GCCCATATCA AGTGA
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| Protein sequence | MKKSMLLGGL ALTATLLLAG CGKSNDVLVV GTNAAFPPFE YVGGQSGDEI KGFDIELAKQ
IAKDAGKTLK VENMKFDSLI VALNSGKIDF IASGMTITPE RQASVNFSEP YYEATQVLLV
NKDNDTIHTL DDIKDKHFAV QLGSTADMMS KKYTQNVTAF NTGFEAIMEL KNGKVDLVLF
DSEPAANYLA KNPDLKLIKL DFPPEFYGFA VSKQQPELLN SINNTLKNLK ESGQYQALVS
AHIK
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