Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3050 |
Symbol | |
ID | 4253621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3649960 |
End bp | 3650394 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119692 |
Product | LrgA family protein |
Protein accession | YP_735178 |
Protein GI | 113971385 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00119689 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0263199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTCC TACAAGCCGC AATACGTCGA TGCCGTCATG GGGCTTTATT GTTAACTCAA ATTGGCCTCT TTTGTTTATT GTCTTTAGCC TGCCATTGGT TAGCCACTTG GGCGCATTTA CCTGTGCCAG GTAGTGTTTT AGGTTTAGGT ATCTTACTGA TTTTACTTGC GACTAAGCTA ATACCTGAAA ATGCGGTGCA GCTTGGTGCC GCTTGGTTGA TTGGTGAGTT GCTGCTGTTT TTTATTCCGC CAGTGATCTC TGTTATCAAG TACGAAGGCC TGTTTGAGCA ATATGGGGTG AATATTCTCT TCACCTTAGT CATGGGCAGT GTGTGCGTGA TGGTGGGTAC GGGATTTGTG GTTGACCGAG TATTTCGTTT CGAGCGTCAA CTCAATATCA AAAAGCATGC ACGTCGCCAT GCTAAGGCCG CCTAA
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Protein sequence | MSFLQAAIRR CRHGALLLTQ IGLFCLLSLA CHWLATWAHL PVPGSVLGLG ILLILLATKL IPENAVQLGA AWLIGELLLF FIPPVISVIK YEGLFEQYGV NILFTLVMGS VCVMVGTGFV VDRVFRFERQ LNIKKHARRH AKAA
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