Gene Shewmr4_3044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3044 
Symbol 
ID4253615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3642300 
End bp3643253 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content50% 
IMG OID638119686 
Producthypothetical protein 
Protein accessionYP_735172 
Protein GI113971379 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0242225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.154474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGTCGT TCAAATCCCC TTCCCATAAA GCGCAGCATT TACGTCTCGG GCTTGCCATG 
TGGTCGCATA ACCATTGGCA AGAAAGTGTT TATGGTTCAG GTACTAAACA GGCCGACAGA
CTTGCCCGCT ATGCCAGCAT CTTCAACACA GTGGAAGGCA ATACCAGCTT TTACGCTACG
CCAAATGCGC AAACGGTAAT GAATTGGCAC AGCGCTACTC CCGATGATTT TCGCTTTACC
TTCAAACTGC CACAAAACAT CACCCATCAA CTGCAGTTGC AGCATTGTCA GCAGGAGCTA
TTGGCCTTCT TCCAAATGAT GGCACCCTTG GTCGAAAAAA CCGGCTTGTG GAAAATTCAG
CTCCCCGCCG CATTCGGCCC CGAACAGCTG CCAGTGCTAG CAGGTTTTTT TGATCTTTTA
CCGCAAGGCT TAAGTTATGG CGTAGAGGTT CGCCATTTAG CCTTTTTTGC CAAGGGAGAC
GCAGAGCGAG CGCTAAATCG CCTACTGATA GACAGACAAG CCAATCGCAT TATCATGGAC
AGTCGGCCAC TGTTTGCCCT GCCGCCCGCT AACGAGGCCA TTATCGATGC CCATAAGAAA
AAACCACAGG TGCCCGTGCA CGCTATAGCG ACCGCCCATA CGCCCGTGGT GCGTTTTATT
GGTCAAACGG ATGGCACGAT TGAAGCCTTA GCGGCGAGTA ACAATAAATT GCAGGTGAAT
GATAACGATA GCTTTTTTAA CAACTGGCGA AGGCAATTAG CGCAATGGAT AAAAGAAGGC
CGTGAGCCTT ATCTGTTTAT CCATACGCCC GATAACCAAA CCGCGCCCGA ATTAGCGGTA
CGTTTATACC AGCAATTGCA GCAACAACTG GCCGATGAGG TCAGCTTACC CACGATTCAG
TTGCATGAGC CGCCATTGGC TGAGCCCGCC GCACAAATGC AACTGACCTG GTAA
 
Protein sequence
MTSFKSPSHK AQHLRLGLAM WSHNHWQESV YGSGTKQADR LARYASIFNT VEGNTSFYAT 
PNAQTVMNWH SATPDDFRFT FKLPQNITHQ LQLQHCQQEL LAFFQMMAPL VEKTGLWKIQ
LPAAFGPEQL PVLAGFFDLL PQGLSYGVEV RHLAFFAKGD AERALNRLLI DRQANRIIMD
SRPLFALPPA NEAIIDAHKK KPQVPVHAIA TAHTPVVRFI GQTDGTIEAL AASNNKLQVN
DNDSFFNNWR RQLAQWIKEG REPYLFIHTP DNQTAPELAV RLYQQLQQQL ADEVSLPTIQ
LHEPPLAEPA AQMQLTW