Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3044 |
Symbol | |
ID | 4253615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3642300 |
End bp | 3643253 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638119686 |
Product | hypothetical protein |
Protein accession | YP_735172 |
Protein GI | 113971379 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0242225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.154474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGTCGT TCAAATCCCC TTCCCATAAA GCGCAGCATT TACGTCTCGG GCTTGCCATG TGGTCGCATA ACCATTGGCA AGAAAGTGTT TATGGTTCAG GTACTAAACA GGCCGACAGA CTTGCCCGCT ATGCCAGCAT CTTCAACACA GTGGAAGGCA ATACCAGCTT TTACGCTACG CCAAATGCGC AAACGGTAAT GAATTGGCAC AGCGCTACTC CCGATGATTT TCGCTTTACC TTCAAACTGC CACAAAACAT CACCCATCAA CTGCAGTTGC AGCATTGTCA GCAGGAGCTA TTGGCCTTCT TCCAAATGAT GGCACCCTTG GTCGAAAAAA CCGGCTTGTG GAAAATTCAG CTCCCCGCCG CATTCGGCCC CGAACAGCTG CCAGTGCTAG CAGGTTTTTT TGATCTTTTA CCGCAAGGCT TAAGTTATGG CGTAGAGGTT CGCCATTTAG CCTTTTTTGC CAAGGGAGAC GCAGAGCGAG CGCTAAATCG CCTACTGATA GACAGACAAG CCAATCGCAT TATCATGGAC AGTCGGCCAC TGTTTGCCCT GCCGCCCGCT AACGAGGCCA TTATCGATGC CCATAAGAAA AAACCACAGG TGCCCGTGCA CGCTATAGCG ACCGCCCATA CGCCCGTGGT GCGTTTTATT GGTCAAACGG ATGGCACGAT TGAAGCCTTA GCGGCGAGTA ACAATAAATT GCAGGTGAAT GATAACGATA GCTTTTTTAA CAACTGGCGA AGGCAATTAG CGCAATGGAT AAAAGAAGGC CGTGAGCCTT ATCTGTTTAT CCATACGCCC GATAACCAAA CCGCGCCCGA ATTAGCGGTA CGTTTATACC AGCAATTGCA GCAACAACTG GCCGATGAGG TCAGCTTACC CACGATTCAG TTGCATGAGC CGCCATTGGC TGAGCCCGCC GCACAAATGC AACTGACCTG GTAA
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Protein sequence | MTSFKSPSHK AQHLRLGLAM WSHNHWQESV YGSGTKQADR LARYASIFNT VEGNTSFYAT PNAQTVMNWH SATPDDFRFT FKLPQNITHQ LQLQHCQQEL LAFFQMMAPL VEKTGLWKIQ LPAAFGPEQL PVLAGFFDLL PQGLSYGVEV RHLAFFAKGD AERALNRLLI DRQANRIIMD SRPLFALPPA NEAIIDAHKK KPQVPVHAIA TAHTPVVRFI GQTDGTIEAL AASNNKLQVN DNDSFFNNWR RQLAQWIKEG REPYLFIHTP DNQTAPELAV RLYQQLQQQL ADEVSLPTIQ LHEPPLAEPA AQMQLTW
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