| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3033 |
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| Symbol | |
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| ID | 4253604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3625905 |
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| End bp | 3628517 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119675 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_735161 |
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| Protein GI | 113971368 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.441038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.600162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG TTAATAAGTT AACGGCTATT TCTTTAGCTG TAGCCGCAGC TTTGCCAATG
ATGGCAAGTG CTGATGTGAT GATCACTGAA TATGTTGAAG GTAGCTCAAA CAACAAAGCT
ATCGAATTAT ATAACAGCGG TGATACGGCA ATTGATCTTT CGGGTTATAA ACTCGTTCGT
TATAAAGATG GCGCAACTGA TGCGCTTGAT ATGCAGGTAT TAGATGGACA AAGTATTGCG
CCAAAATCGA CAAAAGTCAT TTTAAACTCA AGTGCAGTCA TTACCCTTCC TCAAGGTGTC
GACAGTTTTT CGGGTTCTTT AAGTTTTAAC GGTGGCGATG CGGTTGCCTT AGTTAAAGAT
GGCGCAGTGG TCGATATTAT CGGTGACGTG CCAACGCCGA CAGGTTGGGG GCTGGATGTC
ACTCTCAAGC GTAAACTCGA TGCATTAGTC GCCAACACTG TCTTTAATCC TGCCCAGTGG
GAACAATTAC CTAAAGATAC ATTTACTGGT TTGGGTTCGC TAGAAACCCC AACTGAGCCT
GAAACACCAG TCTTTAGCTG CAGCGGCGCG AAAATCGTTC CGATTTATCA AGTCCAAGGC
GCGGGTGAAT CTAGCCCTTA TGTGCCTGAA GGTGCATTCG AGTCTGAAAG CGAAGTGACG
GTTCGCGGTG TGGTGACTGC CCGTGGCGAG AGCTTATTCA AAGGTTTCTA TCTCCAAGAA
GTGAAGGGCG ATAACTCGCC ATACACTTCC GATGGCGTGT TCGTGTTTTT AGGTGAGAAT
CCACCAGAAG CGATTCAACC CGGCGTTGAA GTCTGCGTCC AAGGTAAGGT GAAGGAATAC
TTCGGCCTAA CCCAAATAGA TATCAAAACT GACAAGAAAT TCGAAGTCGG TGCTAAGGGC
GAAGTCCCTG CTGCGGCGCC ATTCTATGTG GCCGATGGCG AAACTTTAGC GCAGGCATTA
GAGCGCTACG AAGGCATGAA CGTGAAACTG GATGCGGGCA GCGATCTGAA GATCAGCCGT
ACCTTCAGTT ACGATTATGC TGGCCGTCGT AATAATATGC TGGTGTCCTA CAAGGCGCCG
TTGATGAAGC CAACTCAGCT GTATCCAGCA CTGTCACCAG AGGCGACGGC TTTAGTTAAA
TCTAACCTTG AAAATCAGTT GTTTATCGAA TCTGACTACA AGCCAGCCGA TGGTGTTATT
CCTTACTTCC CTGACTTTAA CGTCGAAACA GGTTATATCC GTGTGGGTGA CCAGTTGACC
AACCTCGAAG GTGTGATTGG TTACAGCTAC GGTGCTTACC GTTTAGTGGC GACCAACACT
ATCACCGCTG GTGACTTTAT CCGTGGTGAT GATAGAACCG ACGCACCAAG TGTGGCCACT
AAGGGCGATA TCCGTGTCGC CAGCTTTAAC GTGCTGAACT TCTTTAACGA TGTTGTTGGT
GGTGATACTA ACCCATCGGG CAGTAACCGC GGCGCCTTGA CCGAAGAAGA AATGCTGCTG
CAACGTGCGA AAATCGTCAG CGCCATTACC GCCATGAACG CCGATATCGT CGGTTTAATG
GAAATCGCTA ACAACGGTTT TGGTGAAAAG AGCGCGATTA AGAACTTAGT CGATGCCTTA
AACGAGAAGC AAACCGCTGA AAATGCTTAC AGCTTCGTTG AAATCACCGA CGAAGATAAA
TACGACGGTA AGTACTTCGG TAGTGATGCC ATTACTGTAG GTATGCTTTA CCGCGCGGGT
AAAGTGAGCC TTGCGGGTGC GGCTCGTGCG ATTGATACTC CAGAGCAGCA CGCGACCGCT
GGCAGTGTGA CTCGTGTTAA AGATGGCAAG ACTGAGACTA ACCCAGGTAA CGATGCTTAC
CAACGTCACA GCCTAGCGCA AACCTTTAAG ATCCATGAAC AGAACTTAAC AGTTGTTGTT
AACCATCTGA AATCAAAAGG TTCAGGCTGT TTAGAAGATT GGGTCAACTT CGAAGAGTCA
GTCGATCCGG CCGATCAACA GGGCAAGTGT AATGCCTTCC GCGTATCGGC TGCTAAAGTG
CTCGGCGAAG CCTTAAAAGA CGTTAAAGGC GATCTGCTGG TGATTGGCGA TATGAATGCC
TACGGCATGG AAGATCCTAT CCGCGTATTG ACCGATTACG ATGCGAGCAA GTCTGAGCGC
GATATCATGA CCGCCTCATG GACCACCTTA GATGGCAAAG TGTTTGAGCG CCAAGGTAGC
AAGATTGAGA AGGGCTATGG CCTAATCAAC CTCAATACTC AGGCCCACGG CGCTGGAACT
TACTCATACA GCTACAACGG TGAGTTAGGT AACCTCGACC ATGCCTTAGC AAACACCAGT
CTTGCCAAGC GTTTAGTGGA TATCGAAGAT TGGCATATCA ACTCGGTGGA ATCTAACCTG
TTCGAATACG GCAAAAAATT CTCTGGTGAA CTGGCCAAAT CTGAGAATGC TTTCTCAGCG
TCTGACCACG ATCCCGTTAT TGTCGCACTT AGCTACCCAG CGCCTGTTGA GCCACCAAAA
CCTGAGCCAA AACCAAAGGA TGATGGTGGC GCGTTAGGAT ACTTGGGTCT AGCCTTGCTA
TCCCTATTCG GCTTACAACG CCGTCGACGT TAA
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| Protein sequence | MDNVNKLTAI SLAVAAALPM MASADVMITE YVEGSSNNKA IELYNSGDTA IDLSGYKLVR
YKDGATDALD MQVLDGQSIA PKSTKVILNS SAVITLPQGV DSFSGSLSFN GGDAVALVKD
GAVVDIIGDV PTPTGWGLDV TLKRKLDALV ANTVFNPAQW EQLPKDTFTG LGSLETPTEP
ETPVFSCSGA KIVPIYQVQG AGESSPYVPE GAFESESEVT VRGVVTARGE SLFKGFYLQE
VKGDNSPYTS DGVFVFLGEN PPEAIQPGVE VCVQGKVKEY FGLTQIDIKT DKKFEVGAKG
EVPAAAPFYV ADGETLAQAL ERYEGMNVKL DAGSDLKISR TFSYDYAGRR NNMLVSYKAP
LMKPTQLYPA LSPEATALVK SNLENQLFIE SDYKPADGVI PYFPDFNVET GYIRVGDQLT
NLEGVIGYSY GAYRLVATNT ITAGDFIRGD DRTDAPSVAT KGDIRVASFN VLNFFNDVVG
GDTNPSGSNR GALTEEEMLL QRAKIVSAIT AMNADIVGLM EIANNGFGEK SAIKNLVDAL
NEKQTAENAY SFVEITDEDK YDGKYFGSDA ITVGMLYRAG KVSLAGAARA IDTPEQHATA
GSVTRVKDGK TETNPGNDAY QRHSLAQTFK IHEQNLTVVV NHLKSKGSGC LEDWVNFEES
VDPADQQGKC NAFRVSAAKV LGEALKDVKG DLLVIGDMNA YGMEDPIRVL TDYDASKSER
DIMTASWTTL DGKVFERQGS KIEKGYGLIN LNTQAHGAGT YSYSYNGELG NLDHALANTS
LAKRLVDIED WHINSVESNL FEYGKKFSGE LAKSENAFSA SDHDPVIVAL SYPAPVEPPK
PEPKPKDDGG ALGYLGLALL SLFGLQRRRR
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