Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3020 |
Symbol | purT |
ID | 4253591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3606924 |
End bp | 3608099 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119662 |
Product | phosphoribosylglycinamide formyltransferase 2 |
Protein accession | YP_735148 |
Protein GI | 113971355 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) |
TIGRFAM ID | [TIGR01142] phosphoribosylglycinamide formyltransferase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.190979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGAA CTCCCTACAC AGAGGGCGCT CGACGCGCCA TGTTGCTTGG CTGCGGTGAG CTAGGTAAAG AAGTCGCCAT CGAGCTCCAA CGCTTAGGTG TTGAAGTGAT TGGCGTCGAT CGTTATCCCA ATGCCCCCGC CATGCAAATT GCCCATCGCT CCCATGTGAT CAATATGCTC GATGCAAAAG CGCTTCGCGC CATTATCGAG CTAGAAAAGC CCCACTTAGT GATCCCCGAA ATTGAAGCTA TTGCCACTCA AACCTTAGTT GAGATGGAAG CCGAAGGCCT CAATGTCGTG CCGACAGCGC GCGCAACTCA GCTGACCATG GACAGAGAAG GCATTCGTCG CCTCGCCGCC GAAACCTTAG GTCTGCCGAC CTCGCCCTAT TTCTTCTGCG ACACTGAAAC CGAATTTAAT CAAGCCATTG GCAAGATTGG CGTGCCCTGC GTAGTCAAAC CCGTGATGAG CTCATCGGGC AAGGGCCAAA GTGTTATCCG TGATGTATCC CAAAGCGCCA AAGCCTGGCA ATATGCCCAA GAAGGCGGCC GCGCGGGCGG TGGTCGTGTG ATTGTCGAAG GCTTTATCCC CTTCGATTAC GAAATTACCC TGCTGACCAT TAGCGCAGTC AATGGCATCC ACTTCTGCGC GCCAATTGGC CACAGGCAAG AAGACGGCGA CTACCGCGAG TCATGGCAAC CTCAAGCCAT GTCGGCCGAC GTGCTAGCAA AATCCCAAGC AATCGCCAGC AAAGTGGTGG AAGCCCTCGG CGGTTACGGC TTATTTGGGG TCGAGCTGTT TGTGAAGGGC AGCGATGTGT ACTTCTCTGA AGTCTCGCCT CGTCCGCACG ATACCGGTTT AGTCACCTTA ATTAGCCAAG ATTTATCCGA GTTTGCACTG CATGTCAGGG CAATTCTTGG CCTGCCGATT CCGAATATCC ATCAACATGG CCCCAGCGCC TCGGCGGTAG TATTGGTGGA AGGCAAATCG AAAAACATTC GCTATCAAGG TCTTGCCGAT GCCTTGGCGG CGGAAAATAC TCAGCTCAGA TTATTCGCTA AGCCTGAAAT CGATGGTCGC CGCCGTTTAG GGGTTGCCCT CGCCCGCGAT AAAGATATCG AAAGCGCAGT CAATAAAGCG CTGGATAGTG CATCTAAGGT AAAAGTGATT TTCTAG
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Protein sequence | MIGTPYTEGA RRAMLLGCGE LGKEVAIELQ RLGVEVIGVD RYPNAPAMQI AHRSHVINML DAKALRAIIE LEKPHLVIPE IEAIATQTLV EMEAEGLNVV PTARATQLTM DREGIRRLAA ETLGLPTSPY FFCDTETEFN QAIGKIGVPC VVKPVMSSSG KGQSVIRDVS QSAKAWQYAQ EGGRAGGGRV IVEGFIPFDY EITLLTISAV NGIHFCAPIG HRQEDGDYRE SWQPQAMSAD VLAKSQAIAS KVVEALGGYG LFGVELFVKG SDVYFSEVSP RPHDTGLVTL ISQDLSEFAL HVRAILGLPI PNIHQHGPSA SAVVLVEGKS KNIRYQGLAD ALAAENTQLR LFAKPEIDGR RRLGVALARD KDIESAVNKA LDSASKVKVI F
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