Gene Shewmr4_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3017 
Symbol 
ID4253588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3603115 
End bp3603531 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content45% 
IMG OID638119659 
Producthypothetical protein 
Protein accessionYP_735145 
Protein GI113971352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0114113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTGG ACTATTTTGC CTTAGGCATT TTATTTTTTG TCATTGTGGT GATTTTTTAT 
GGCGTGATTG CGATTCACGA CATCCCGTAT GAAATTGCGA AAAAGCGCAA TCATCCCCAG
CAGGATGCAT TACATATCGC CGGGTGGGTC AGTTTATTTA CCTTACATGC TATTTGGCCA
TTTTTATGGA TTTGGGCGAC CTTGTATCGA GAGGATAGAG GCTGGGGCTT TAGCACTGTG
ATGAAGCGCG AAGAGGCATT GGAGGATGAT GTTAAAGCGC TAAGGGAAAC GGTATTGGCC
TTACAGACAA AGCTTGAGCG ACTCGAATCG ACAGCCGCTC CAGCGGTTGT AAACCATCAA
GCTGCAATGA CAGCAGAAGC TAGTGTGACC GAAGTTAGCC AAAAAGCCGA GGTATAA
 
Protein sequence
MFLDYFALGI LFFVIVVIFY GVIAIHDIPY EIAKKRNHPQ QDALHIAGWV SLFTLHAIWP 
FLWIWATLYR EDRGWGFSTV MKREEALEDD VKALRETVLA LQTKLERLES TAAPAVVNHQ
AAMTAEASVT EVSQKAEV