Gene Shewmr4_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3008 
Symbol 
ID4253579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3594893 
End bp3595201 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content52% 
IMG OID638119650 
Producthypothetical protein 
Protein accessionYP_735136 
Protein GI113971343 
COG category[R] General function prediction only 
COG ID[COG3313] Predicted Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000643825 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.102942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT TAGCCTTTTT CGAAATACCT AGCCCTTGCA TCGGTGTGTG CCAAACCGAT 
GCCCGCGGCT ATTGCAAAGG TTGCCTGCGT AGTCGTGATG AGCGATTCAA TTGGTTGCAC
TTTACCGACG CGCAAAAGCA CGATGTGATC CGTTTATGCA ACCAACGTAA GCGTCGGCGG
CAGTTGGCCT TATACAAAGC CCGTCAGCAA GCACTTGAGC AGGAGAGGGC GGCGCTTAAT
CCCCAACTCG ATTTTGCGCC GCAAGATGCC GCCGAATTGG ACCTCGATGA TTTTGATCTC
GAGGAATAA
 
Protein sequence
MEQLAFFEIP SPCIGVCQTD ARGYCKGCLR SRDERFNWLH FTDAQKHDVI RLCNQRKRRR 
QLALYKARQQ ALEQERAALN PQLDFAPQDA AELDLDDFDL EE