Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3008 |
Symbol | |
ID | 4253579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3594893 |
End bp | 3595201 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638119650 |
Product | hypothetical protein |
Protein accession | YP_735136 |
Protein GI | 113971343 |
COG category | [R] General function prediction only |
COG ID | [COG3313] Predicted Fe-S protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000643825 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.102942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGT TAGCCTTTTT CGAAATACCT AGCCCTTGCA TCGGTGTGTG CCAAACCGAT GCCCGCGGCT ATTGCAAAGG TTGCCTGCGT AGTCGTGATG AGCGATTCAA TTGGTTGCAC TTTACCGACG CGCAAAAGCA CGATGTGATC CGTTTATGCA ACCAACGTAA GCGTCGGCGG CAGTTGGCCT TATACAAAGC CCGTCAGCAA GCACTTGAGC AGGAGAGGGC GGCGCTTAAT CCCCAACTCG ATTTTGCGCC GCAAGATGCC GCCGAATTGG ACCTCGATGA TTTTGATCTC GAGGAATAA
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Protein sequence | MEQLAFFEIP SPCIGVCQTD ARGYCKGCLR SRDERFNWLH FTDAQKHDVI RLCNQRKRRR QLALYKARQQ ALEQERAALN PQLDFAPQDA AELDLDDFDL EE
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