Gene Shewmr4_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2998 
Symbol 
ID4253569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3587152 
End bp3587772 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content51% 
IMG OID638119640 
Producttranscriptional regulator 
Protein accessionYP_735126 
Protein GI113971333 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00441752 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.169259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA CTGATAAGAT TATTCAATTA CTCAAGTTGC ATGGTCCTTT AACGGCAAAG 
ACCCTAGCGG AAGAACTGGC ACTGACGACC ATGGGAGTTA GGCAGCATTT GCAGGCCTTA
GAGGATGCGG GTGATGTTGA TATTGAAGAT AGGGTCGAAG GCCGTGGACG CCCAACCCGT
TATTGGGGAT TAACCGAGCA GAGTCGCACT CACTTTGCCG ATCGCCACAG TGAGCTTAGT
TTGCAATTGA TTGATTCCGT TAAAATGATA TTTGGCGATC AAGGCCTAGA TAAGCTGATC
GAGCATAGGG AGCAAACGGC CATGCAGCAG TATCGCAGCG CGATGCTCGG CATGACGGAT
ATAGCCAGTC GCCTAACGAA ACTGGTGGAG CTGCGTACCC TCGAGGGCTA TATGGCGACG
CAGGAACAAG CCGATGGCGT TTTCTGGTTA CTTGAGAATC ACTGCCCAAT TTGCAGCGCA
GCGACTAAGT GCCAAAACTT TTGCCGCTCC GAACTGCAAC AGTTCCAGCA ATTATTTGCC
GATATCGCCA CTGTAAGCCG TGAAGAGCAT ATCATCGATG GCGCTCGTCG CTGCGCCTAT
CGCATTGCGC CTTTATCTTA G
 
Protein sequence
MKTTDKIIQL LKLHGPLTAK TLAEELALTT MGVRQHLQAL EDAGDVDIED RVEGRGRPTR 
YWGLTEQSRT HFADRHSELS LQLIDSVKMI FGDQGLDKLI EHREQTAMQQ YRSAMLGMTD
IASRLTKLVE LRTLEGYMAT QEQADGVFWL LENHCPICSA ATKCQNFCRS ELQQFQQLFA
DIATVSREEH IIDGARRCAY RIAPLS