Gene Shewmr4_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2996 
Symbol 
ID4253567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3585126 
End bp3586319 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content48% 
IMG OID638119638 
Productglobin 
Protein accessionYP_735124 
Protein GI113971331 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000576435 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.181958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGATA GCCGTACCAT CCAGATTATT AAGAGCACTA TTCCCCTTCT CGAATCAGCA 
GGTCCTGCAC TGACCCAGCA TTTTTACCAA CGGATGTTTA CCCACAATCC TGAGTTAAAA
GATGTGTTTA ACTTGGCTCA TCAACATTCA GGTGGTCAGC CCGTCGCCTT GTTTAACGCA
GTTGCAGCCT ATGCCAAGAA CATCGATAAC CTAGGTGCAT TAGGTACGGC CGTCGAGCGC
ATTGCCCAAA AGCACACTGG TTTTTTAATT CAGCCTGAAC AATATGCCAT TGTCGGCGGT
CACCTTCTGG CCACACTACA AGAACTGGGA GGAGAGGCGG TTACCGAAGA AGTACTCACC
GCATGGGGCG ATGCTTATCA ATTTTTAGCT AACATTTTTA TCCAGCGCGA AGCACAGATT
TATCAAGAAA GTGCTCAACA GGATGGCGGT TGGTCTGGGG TTCGTGAGTT TATTATTAGC
GAGAAAAAAG CCGAGTCAGC CGTAATCACC TCGTTTGTCT TAACGCCAAC TGATGGGCAA
GCGGTAAAAG ACTTCACTCC GGGGCAATAC TTGAGCATTA AGCTGCAACA TCCTAAGCTC
GCCTTCGATG AAATTCGTCA GTACTCGCTG TCTGATGCGC CAAATGGCCG AACCTACCGC
ATTAGCGTGA AACGAGAACC TAATGGCCAA GTATCAAACC TGCTTCACGA TATGTTGCAA
GTGGGCGATA CAGTTTCAGT CATGCCGCCT GCGGGTGATT TCGCCTTAAC GGCTCAGCCA
AAGACGCCTA TCGTATTGAT TTCGGCAGGA GTTGGGCAAA CGCCGATGAA GAGTATGTTG
AACCAGTTGC TCAAACTAAA ACACCCAAGT GCTGTCACTT GGTTGCACGC TTGCGAGCAT
GGTGAAGTAC ACGGCTTTAA AACAGCGGTT AAAAGCAAAC TTGGTCAACA TGCCAATCTT
GCCAGTCATG TGTGGTATCG AGAGCCTAAA GAGGCAGACA TTTTAGGACA AGATTATGAT
TTTGAAGGAA CGATGAACTT AACCTCAGTC GCCGATAAAA TCGCTACCGA TGCGCATTAC
TATTTCTGCG GCCCGATTGG CTTCATGGCT TCTATCAAGC AGCAATTACT CGCCTTTGGT
GTGCCTAGCG AGCAAATGCA TTATGAAGTC TTCGGTCCAC ATGCCGAGCT ATAA
 
Protein sequence
MLDSRTIQII KSTIPLLESA GPALTQHFYQ RMFTHNPELK DVFNLAHQHS GGQPVALFNA 
VAAYAKNIDN LGALGTAVER IAQKHTGFLI QPEQYAIVGG HLLATLQELG GEAVTEEVLT
AWGDAYQFLA NIFIQREAQI YQESAQQDGG WSGVREFIIS EKKAESAVIT SFVLTPTDGQ
AVKDFTPGQY LSIKLQHPKL AFDEIRQYSL SDAPNGRTYR ISVKREPNGQ VSNLLHDMLQ
VGDTVSVMPP AGDFALTAQP KTPIVLISAG VGQTPMKSML NQLLKLKHPS AVTWLHACEH
GEVHGFKTAV KSKLGQHANL ASHVWYREPK EADILGQDYD FEGTMNLTSV ADKIATDAHY
YFCGPIGFMA SIKQQLLAFG VPSEQMHYEV FGPHAEL