| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2994 |
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| Symbol | |
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| ID | 4253565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3581745 |
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| End bp | 3582593 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638119633 |
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| Product | putative lipoprotein |
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| Protein accession | YP_735122 |
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| Protein GI | 113971329 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000158327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.33203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTATCTG TTACAATCGA ATGCTTTCTA TTTTATCGTG AAATGGAAAA ATTCTTAACT
ACAACTTATA AAGAATTGAA TTCAAGTATG TATAAATTCT CCAAAGGCTT AACCTTAGTC
CTATTTTCGC TAGCGTTATC AGCCTGTAGT AGCAGTCCTG AAGATAACGA TATTGCCGCC
AAAACCTCAC CTGATGTGCT CTATTCTCAG GCAAGAACCT CCATGGAACT TGGCAATTAC
TCTAAAGCCG TCCGTTCATT GGAAGCGTTA GACTCACGCT TCCCCTTCGG ACCACATAAA
ACTCAGGTTC AATTGGATCT GATTTATGCC TATTACAAAA TGGATGATGT TGCCTCTGGC
ATTGCCAACA TTGACAGATT CATCCGCTTA AACCCCACTC ACCCTGATAT CGATTATGTC
TACTATATGC GTGGACTCGT CAATATGCAG GCGGACAGCT ATCTGTTCCA CGATATGTTA
AATATCGATA GAACCGACCG CGATCCTAAA AATGCCCAAG ATGCCTTTAA GGATTTTGAT
CGTTTAATCA AAACCTATCC CAACAGCAAG TATGCTGCCG ATGCACAAAA ACGCATGTTG
TCGCTGAAAA ACCGTTTAGC AAAATATTCC ATTCAAGTTG CTGAGTATTA CCTCAAAATG
AATGCTTGGA GTGCTGCGGC CGTTCGTGCT CAATCTGTGT TGGAAACATA TCCCGGCACC
CCTTCAACGG AGCGGGCACT GGAGATTATG GCAGAAGCTT ATGGCGAGTT AGGTCAGAAC
CAACTGAAGC AAAACGTGCT CATGGTAATG CAAGCTAACT TCCCAAACAA CGAAATCTTA
TCGAACTAA
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| Protein sequence | MLSVTIECFL FYREMEKFLT TTYKELNSSM YKFSKGLTLV LFSLALSACS SSPEDNDIAA
KTSPDVLYSQ ARTSMELGNY SKAVRSLEAL DSRFPFGPHK TQVQLDLIYA YYKMDDVASG
IANIDRFIRL NPTHPDIDYV YYMRGLVNMQ ADSYLFHDML NIDRTDRDPK NAQDAFKDFD
RLIKTYPNSK YAADAQKRML SLKNRLAKYS IQVAEYYLKM NAWSAAAVRA QSVLETYPGT
PSTERALEIM AEAYGELGQN QLKQNVLMVM QANFPNNEIL SN
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