Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2989 |
Symbol | |
ID | 4253560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3575697 |
End bp | 3576515 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119628 |
Product | CDP-diacylglycerol--serine O-phosphatidyltransferase |
Protein accession | YP_735117 |
Protein GI | 113971324 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1183] Phosphatidylserine synthase |
TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000505738 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.32761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATT CCTCAAATCA AACAGTAAAG AATAAAGGTA TCTATTTACT GCCGAATTTA TTCACCACTG CCGGCTTGTT TTCCGGTTTC TATGCTGTGA TTGCCTCTAT GAATGCTAAC TTTGAAGCGG CGGCGATTGC GATTTTTGTG GCCATGATTT GCGATGGTTT AGACGGTAGA GTGGCAAGAT TAACGAACAC GCAAAGTGAC TTTGGTGCCG AATATGACAG CATGGCAGAC ATGGTGTCCT TTGGTATGGC GCCAGCATTA CTCGCCTACA ATTGGGCGCT TGCGGATTTA GGCAAAGTTG GTTGGCTTGC AGCATTTATC TATTGTGCGG GCGCCGCATT AAGGCTGGCA CGTTTTAATA CTCAAGTTGG CGTGGCAGAT AAGCGTTATT TTCAAGGCTT AGCGAGTCCT GCTGCGGCGG CAGTTATTGC AGGTAGCATT TGGCTTGGCA ACCAGTACAA CCTCGATGGT AAGAATATCA GTTGGATAGC CGGATTGATT ACGGCCACCA CGGGATTATT AATGGTGAGT AATTTCCGTT ATCACTCATT TAAGGAAATT GACTGGCGCG GCAAAGTGAA TTTCATTGCT ATCTTATTTG TGGTTGGCGT GTTTGTGGTG GTGTCGGTGC AACCGGCATT AATACTCTGT ATTGGTTTTT ACCTCTACGC TATCTCGGGG CCTGTGATCA CCATTCGTAC CGTGAGAAAA CTAAAAGTGG CGCACATTGT GGGCGATGGC GATCATGAAA AGGAACAAGG CACGGGAGAG GGCACCAAGA GTTCGACAAA TTCTACGGAT AATCCTTAG
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Protein sequence | MQNSSNQTVK NKGIYLLPNL FTTAGLFSGF YAVIASMNAN FEAAAIAIFV AMICDGLDGR VARLTNTQSD FGAEYDSMAD MVSFGMAPAL LAYNWALADL GKVGWLAAFI YCAGAALRLA RFNTQVGVAD KRYFQGLASP AAAAVIAGSI WLGNQYNLDG KNISWIAGLI TATTGLLMVS NFRYHSFKEI DWRGKVNFIA ILFVVGVFVV VSVQPALILC IGFYLYAISG PVITIRTVRK LKVAHIVGDG DHEKEQGTGE GTKSSTNSTD NP
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