Gene Shewmr4_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2989 
Symbol 
ID4253560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3575697 
End bp3576515 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content46% 
IMG OID638119628 
ProductCDP-diacylglycerol--serine O-phosphatidyltransferase 
Protein accessionYP_735117 
Protein GI113971324 
COG category[I] Lipid transport and metabolism 
COG ID[COG1183] Phosphatidylserine synthase 
TIGRFAM ID[TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000505738 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.32761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATT CCTCAAATCA AACAGTAAAG AATAAAGGTA TCTATTTACT GCCGAATTTA 
TTCACCACTG CCGGCTTGTT TTCCGGTTTC TATGCTGTGA TTGCCTCTAT GAATGCTAAC
TTTGAAGCGG CGGCGATTGC GATTTTTGTG GCCATGATTT GCGATGGTTT AGACGGTAGA
GTGGCAAGAT TAACGAACAC GCAAAGTGAC TTTGGTGCCG AATATGACAG CATGGCAGAC
ATGGTGTCCT TTGGTATGGC GCCAGCATTA CTCGCCTACA ATTGGGCGCT TGCGGATTTA
GGCAAAGTTG GTTGGCTTGC AGCATTTATC TATTGTGCGG GCGCCGCATT AAGGCTGGCA
CGTTTTAATA CTCAAGTTGG CGTGGCAGAT AAGCGTTATT TTCAAGGCTT AGCGAGTCCT
GCTGCGGCGG CAGTTATTGC AGGTAGCATT TGGCTTGGCA ACCAGTACAA CCTCGATGGT
AAGAATATCA GTTGGATAGC CGGATTGATT ACGGCCACCA CGGGATTATT AATGGTGAGT
AATTTCCGTT ATCACTCATT TAAGGAAATT GACTGGCGCG GCAAAGTGAA TTTCATTGCT
ATCTTATTTG TGGTTGGCGT GTTTGTGGTG GTGTCGGTGC AACCGGCATT AATACTCTGT
ATTGGTTTTT ACCTCTACGC TATCTCGGGG CCTGTGATCA CCATTCGTAC CGTGAGAAAA
CTAAAAGTGG CGCACATTGT GGGCGATGGC GATCATGAAA AGGAACAAGG CACGGGAGAG
GGCACCAAGA GTTCGACAAA TTCTACGGAT AATCCTTAG
 
Protein sequence
MQNSSNQTVK NKGIYLLPNL FTTAGLFSGF YAVIASMNAN FEAAAIAIFV AMICDGLDGR 
VARLTNTQSD FGAEYDSMAD MVSFGMAPAL LAYNWALADL GKVGWLAAFI YCAGAALRLA
RFNTQVGVAD KRYFQGLASP AAAAVIAGSI WLGNQYNLDG KNISWIAGLI TATTGLLMVS
NFRYHSFKEI DWRGKVNFIA ILFVVGVFVV VSVQPALILC IGFYLYAISG PVITIRTVRK
LKVAHIVGDG DHEKEQGTGE GTKSSTNSTD NP