| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2986 |
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| Symbol | |
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| ID | 4253557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3567183 |
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| End bp | 3569018 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119622 |
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| Product | oxaloacetate decarboxylase |
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| Protein accession | YP_735114 |
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| Protein GI | 113971321 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.657693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAG TAAATTCGAT TGTGGCGTCT AAGCCATTAC AGTTAACCGA TGTCGTCTTG
AGGGATGCAC ATCAGTCTAT TTTAGCGACG CGTTTACGCA TCGATGACAT GCTTCCGATT
GCACCTCTGC TCGATGAAGT GGGATTTTGG TCGCTGGAGT CTTGGGGCGG AGCGACCTTC
GATGCCTGTA TCCGTTATTT AGGAGAGGAT CCTTGGGATA GGATCCGTGA GCTGAAAAAG
TTAATGCCCA ATACGCCTCA ACAAATGTTA CTGCGTGGTC AAAACCTATT GGGTTATCGC
CATTATGCCG ATGATTTAGT GACTCGTTTT GTTGAGCGTG CCCATGCCAA TGGTGTGGAT
GTATTCCGTA TCTTTGATGC GATGAATGAT GTGCGTAACC TTGAGATGGC AGTAAAAGCG
GTGCGTGACG TCGGTGGGCA CGCGCAAGGC ACAATTTCTT ATACGACCAG CCCTGTTCAT
ACGGTTGATA CTTGGGTCGA TATGGCAAAG CGCCTTGAGG ACATGGGCTG CCATTCGCTG
TGCATTAAAG ACATGGCGGG CCTACTCAAG CCGATGGAAG CCTTTGAGCT TATTAGTCGC
TTAAAATCAC AAACTCAACT CATGCTCTCA TTGCATTGCC ACGCCACGAC GGGGCTAAGT
ACCGCAACCT ATCAAAAGGC GATAGAGGCG GGAATCGATG TGCTCGATAC TGCCATTTCT
TCCATGAGCC AAACCTATGG CCATACGGCA ACTGAAACCG TGGTTGCTAT GGTGGCGGAG
ACCGAGCGTG AAACTCACTA TGACCTTGCC TTACTTGAAG AGATTGCCGC TTATTTCCGT
GAGGTGCGGA AAAAGTACGC CAAGTTCGAA GGAGCGTTAA AAGGTATCGA TTCGCGGATC
CTTCGCGCTC AAGTGCCCGG TGGCATGTTG ACGAATATGG AGAGTCAGCT CAAAGAACAA
GGTGCAGCCG ATAAGCTGGA CGCAGTGCTC GAGGAGATCC CTCGGGTGCG TCAGGATTTA
GGCTTTCTGC CTTTGGTTAC ACCAACTTCG CAAATTGTTG GCTCGCAGGC GGTTATCAAC
GTACTGATGG GGCAAAGATA TCAATCGTTG ACCAAAGAGA CTGAAGGTGT GTTAAGGGGC
GAATATGGTG CCACTCCGGC CCCTGTTAAT CCCGAGTTGC AGGCTCGAGT GCTTAACGGT
GCGGCGGCGA TCACCTGCCG TCCTGCGGAT TTACTCGCAC CCGAGTTGGA CAAACTGCGT
ACGGAGTTAT TATCAAAGGC GCAGGAGCAA GGGATTAGTC TCGTCTCAGA GAGCAAAGAA
AAGTCTCAGG ACGATGACTT ACTCATCTAC GCACTGTTCC CGCAGATTGG CTTACAGTTT
TTAAAGAATC GTCACGATCC CTCGGCCTTT GAGCCAAAAC CTGAACTTGC GCCAGTGTTA
TCTGCTACGC CGCGTGAGGC CGAGATTTAT ACAGTCACGG TTGAGGGGCA AACTTATGTG
GTTGAGGTTG CCGAGGGCGG CGAAATTAGC CAGATCCAAG CTCAGGGGCA AGCCGCACTG
CCGCTTGGCC AAGCTAATCC TTCTCAGTTG AGCGCTGCGC CAATGCCTCA AACCAGTGAG
GTCAAACTTA AGATGAGCGC GCCACTATCG GGCAATATCT TCAAAGTGCA TGTCGGCATT
GGTGACAAGG TGTGCGCCGG TGATGTCGTT ATCATCCTAG AGGCCATGAA AATGGAAACC
GAAATCCGCG CACAGGGGGA TGGCATTATT ACCCATCTCT TTGTGAAAGA AGGGGATTCG
GTTGCCGTGG GTTCTCAATT ACTGGCCTTA GCCTAG
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| Protein sequence | MNRVNSIVAS KPLQLTDVVL RDAHQSILAT RLRIDDMLPI APLLDEVGFW SLESWGGATF
DACIRYLGED PWDRIRELKK LMPNTPQQML LRGQNLLGYR HYADDLVTRF VERAHANGVD
VFRIFDAMND VRNLEMAVKA VRDVGGHAQG TISYTTSPVH TVDTWVDMAK RLEDMGCHSL
CIKDMAGLLK PMEAFELISR LKSQTQLMLS LHCHATTGLS TATYQKAIEA GIDVLDTAIS
SMSQTYGHTA TETVVAMVAE TERETHYDLA LLEEIAAYFR EVRKKYAKFE GALKGIDSRI
LRAQVPGGML TNMESQLKEQ GAADKLDAVL EEIPRVRQDL GFLPLVTPTS QIVGSQAVIN
VLMGQRYQSL TKETEGVLRG EYGATPAPVN PELQARVLNG AAAITCRPAD LLAPELDKLR
TELLSKAQEQ GISLVSESKE KSQDDDLLIY ALFPQIGLQF LKNRHDPSAF EPKPELAPVL
SATPREAEIY TVTVEGQTYV VEVAEGGEIS QIQAQGQAAL PLGQANPSQL SAAPMPQTSE
VKLKMSAPLS GNIFKVHVGI GDKVCAGDVV IILEAMKMET EIRAQGDGII THLFVKEGDS
VAVGSQLLAL A
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