| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2985 |
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| Symbol | |
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| ID | 4253556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3566044 |
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| End bp | 3567174 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119621 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_735113 |
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| Protein GI | 113971320 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.733812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGTT TACTGGCTTT CTGGGCCGAA ACGGGCATAG CTCATTTTAC TGCGGGGCAA
GTCTTGATGA TGGCTGTGGG TGCCTTGCTG TTATACCTTG CGATAGTGCG TGGCTTTGAG
CCACTGCTAC TGTTACCCAT TGGTTTTGGT GCTGTATTGG CGAATATTCC CAACGCGGGC
TTTACCGAAG AGGGAGGAAT GCTCTATTAC GCCTACCATG TTGGGATTGA AACCGGGGTG
TTTCCGCTGC TGATCTTTAT GGGGGTCGGG GCACTGACAG ATTTTAGTGC GCTGATTGCC
AATCCAAAGA CCTTGCTACT CGGCGCAGCG GCGCAGTTTG GGATTTTCGC AACCTTAATT
GGGGCGATAG CGCTAAATCT AGTACCAGGC TTTGAATTTA CCATGCAGGA TGCCGCTGCC
ATTGCCATCA TCGGTGGCGC GGATGGACCA ACGGCGATAT TCCTTGCCTC TAAGCTGGCG
CCTGAGTTGC TCGGGGCGAT TGCCGTGGCT GCCTATTCCT ATATGGCGCT GGTGCCGATT
ATCCAGCCGC CAATCATGCG TTTACTCACG ACCCAAGCCG AGCGTGAGAT AAAGATGGAG
CAGCTCAGGG AGGTGAGTAA AAAGGAAAAG ATTATTTTCC CACTGATGGT CCTGGGCTTA
ACGATTCTAT TCTTACCCGC TGCAACGCCT CTCGTTGGGA TGTTCTGCCT TGGCAACCTA
ATGCGTGAGT CGGGTGTGGT AGATAGATTA TCGAAAACGG CGCAAAACGA GCTGATTAAT
ATCGTCACCA TTTTCTTAGG CTTAGCCGTT GGTTCTAAAC TTTCTGCGGA GCAGTTCTTG
CGCGTCGAAA CCTTAGGCAT CTTAGTGCTT GGCGCGTTGG CGTTCGGCAT TGGTACCGCT
GCAGGGGTGC TGATGGCAAA ACTGATGTGC AAATTAACTG GCGGTAAGGT CAATCCATTA
ATTGGCGCGG CGGGCGTATC TGCAGTGCCA ATGGCGGCAA GGGTGGTGAA TAAGGTGGGG
TTAGAGGCTA ATCACCATAA CTTTTTGCTG ATGCACGCCA TGGGGCCAAA CGTTGCTGGG
GTATTAGGCT CTGCGGTTGC GGCGGGGATT TTACTCGCCG TGCTTGGTTA A
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| Protein sequence | MDGLLAFWAE TGIAHFTAGQ VLMMAVGALL LYLAIVRGFE PLLLLPIGFG AVLANIPNAG
FTEEGGMLYY AYHVGIETGV FPLLIFMGVG ALTDFSALIA NPKTLLLGAA AQFGIFATLI
GAIALNLVPG FEFTMQDAAA IAIIGGADGP TAIFLASKLA PELLGAIAVA AYSYMALVPI
IQPPIMRLLT TQAEREIKME QLREVSKKEK IIFPLMVLGL TILFLPAATP LVGMFCLGNL
MRESGVVDRL SKTAQNELIN IVTIFLGLAV GSKLSAEQFL RVETLGILVL GALAFGIGTA
AGVLMAKLMC KLTGGKVNPL IGAAGVSAVP MAARVVNKVG LEANHHNFLL MHAMGPNVAG
VLGSAVAAGI LLAVLG
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