Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2983 |
Symbol | |
ID | 4253554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3564424 |
End bp | 3565677 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119619 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_735111 |
Protein GI | 113971318 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.799074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTTC AAACCATTAG CCGCATTCCT TTTTGGCAAA AAGTCCTCGC AGGCTTCATT TTAGGTGCGC TCGTTGGCGT ACTTTTAGGT GAAACCGCCA CTGTGCTTAA ACCGCTTGGC GATTTGTTTA TCAGCGCCAT TAAGATGCTG GTTGCGCCAC TGGTCTTCTG TGCGATTGTG GTCAGTATTA CCTCGCTCGG CTCTCAAACG AATCTCAAAC GCTTAAGTCT TAAGACCTTA GGCATGTTCA TGCTGACAGG CACTATCGCC TCACTGATAG GTTTAGCTGT TGGCTCGCTT ATCGATATGG GCGGCACAAT GCAACTGGCA ACCACGGAAG TGCGTGAGCG CAATATTCCA GGCTTTGCGC AGGTGCTGCT CAATATGATC CCAGTGAATC CCTTTGCCTC ACTGGCGGAT GGAAAAGTAC TGCAGATCAT TGTATTTGCC GCATTAGTCG GGATCGCCAT CAACAAGGTT GGCGAGAAAG CCGAGCCACT AAAACGCACC ATCGAAGCGG GTGCCGAAGT TATGTTCCAA CTGACACGCA TGGTGCTAAA ACTCACCCCA ATCGGCGTGT TTGGTTTAAT GGCTTGGGTA GTGGGTGAAT ATGGTTTATC GACCCTATTA CCTCTAGGTA AATTTATCGC CGCTATCTAT ATTGCCGCCC TTATCCATAT GATTTTTGTC TACGGCGGAC TAGTGAAATT TGCCGCGGGT TTAAGCCCTG TGCAATTTTT CCGTAAGGCC ATGCCGGCGC AATTAGTGGC TTTTAGTACC TCTTCAAGCT TCGGCACTCT GCCTGCGAGT ACCAGAGCGG TTGAGACCAT GGGTGTTTCA AAGCGTTATA GCGCCTTCGT TATGCCGCTC GGCGCTACCA TGAACATGGA TGGCTGTGGT GGTATCTACC CTGCGATTGC CGCAATTTTT ATCGCTCAAA TTTACGGTAT TCCACTCGAT ACCTTAGATT ATGTGATGAT TGCCGTTACA GCCACGGTGG CCTCAGTCGG TACGGCTGGC GTGCCAGGCA GCGCCATGGT GATGTTAACT GTTACCTTAG GCGTGATTGG TTTACCCCTA GAAGGTATCG CCTTTATTGC CGCCATCGAC CGTATTATCG ATATGATCCG CACCGCGACC AACGTCACAG GCGATATGAT GACCGCCGTA GTGATTGGCA AATCTGAAAA TGAGCTTGAT GTTGATCAGT TTTACAACAA CGAGACTCAA ACGGCTGCCA TTGCCGATAA TTAA
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Protein sequence | MILQTISRIP FWQKVLAGFI LGALVGVLLG ETATVLKPLG DLFISAIKML VAPLVFCAIV VSITSLGSQT NLKRLSLKTL GMFMLTGTIA SLIGLAVGSL IDMGGTMQLA TTEVRERNIP GFAQVLLNMI PVNPFASLAD GKVLQIIVFA ALVGIAINKV GEKAEPLKRT IEAGAEVMFQ LTRMVLKLTP IGVFGLMAWV VGEYGLSTLL PLGKFIAAIY IAALIHMIFV YGGLVKFAAG LSPVQFFRKA MPAQLVAFST SSSFGTLPAS TRAVETMGVS KRYSAFVMPL GATMNMDGCG GIYPAIAAIF IAQIYGIPLD TLDYVMIAVT ATVASVGTAG VPGSAMVMLT VTLGVIGLPL EGIAFIAAID RIIDMIRTAT NVTGDMMTAV VIGKSENELD VDQFYNNETQ TAAIADN
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