| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2981 |
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| Symbol | |
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| ID | 4253552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3560720 |
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| End bp | 3563569 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119617 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_735109 |
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| Protein GI | 113971316 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAGG GGAATACCTT GAAAAAATGG ATATTAGCGG TTGCAATTTC TGCCGCACTT
GCAGGTTGTG CTACCGAAAC CTCAACTCAA TTACCCGTGG GCGTAAAGTT AATTGAGAAT
GTACAACTGA CGGACTCTGA AGTCGGTATT CCTTTTAAAA AATATCAGCT TGCTAATGGT
TTAACGGTTA TTTTGCATCA AGATCATTCT GATCCCTTAG TGCATGTCGA TGTGACTTAT
CACGTCGGCT CGGCCAGAGA ACTGGCAGGC CGTTCAGGGT TCGCCCATTT ATTCGAACAT
ATGATGTTCC AAGGCTCTGA GCACGTCGCC GATGAGCAAC ATTTTGAGGT GGTAACCGAG
GCGGGGGGCA CGCTGAACGG CTCTACCAAT ACCGATAGAA CCAACTACTT TGAGACAGTC
CCTAGCAACC AGCTCGAAAA AATGCTGTGG CTCGAGTCTG ACCGCATGGG CTTTTTGTTG
CCGGCGCTAA CCAGCGAAAA GTTTGAAGTA CAGCGCGAGA CAGTGAAAAA CGAGCGCGCT
CAACGCATTG ATAATCAACC CTATGGCCGA ATGAGCGAGC GCTTTAATCA GGCGATGTTC
CCGATTGGTC ATCCCTATTC TTGGCCTGTG ATCGGCTGGC CAGAGGATCT TAACCGCGCC
ACAGTGGATG ATGTGAAACA CTTTTTCCAG CGCTGGTACG GTCCGAATAA CGCCACGCTG
ACCATTGGCG GCGATTTTGA TGAACTGCAA GCCTTAGCCT GGGTAAACAA ATACTTTGGC
GAAATCCCCC GTGGTCCCGA GGTTCAACCT GAGCCTAAGA CCTTAGTTAC GCTCGATAAG
ACGCGCTATA TCTCGATGGA AGATAACGTG CATCTGCCGC TGATCCGTAT CGGCTTTCCG
ACTGTGTATG CCAGCCATCC CGATGAAGCC GCTCTGGACT TATTAGCCAA TATCCTCGGT
GGCGGTAAAA CCTCACTCGT GTACAAAAAC CTTGTGAAGG ATGGTTATGC CGTGCAGGCA
AGCGTGAGCC AACCCTGCCA AGAGTTAGCC TGTCAGATGT CGATTTATGC CTTAGCCAAT
CCGCAAAAGG GCGCGACCTT AGCCGAGCTT GAACAGCGCA TTCTCGACTC GATTAATGAG
TTTGAGCAGC GCGGCGTTAC CGACGATGAC CTGCAAAAAG TGAAAGTACA GTTTGAGGCC
GATACCATTT TTGGCTTGCA GAGCGTAAAA GGCAAAGTGT CTATGCTTGC CTTGAATCAA
ACCATGTTTG GTGAGCCGAA TAAGATTGGA GTAGACCTTG CGCGCTACGC CAATGTGACC
AAAGACGATG TGATGCGGGT ATTTAAAAAG TACATCAAAG ACAAGCCTAT GGTGGTGATG
AGTGTGGTAC CGCAGGGAAT GACGGCTTTA GTCGCTCATC CGGATAACTT CACCCCTCAA
ACCTTGCCCG TGGCGAATAC GGCTGTAGAG GGGGATTTAC CTACTGCTAA GTTGGTGTCA
AGTTTCGACC GCTCAACAAT GCCAGCCACG GGCGCGGCGC CCGTGCTTAA AGTCCCGACA
ATTTGGACGA CTAAGTTAGC CAATGGTATC GAAGTGATGG GCACTCAAAG CAGCGAAACC
CCGACTGTGG AGTTAGTGAT TTATCTTAAC GGCGGACACA GATTAGTGCC CGTTGAAAAG
GCGGGTCTGG CAAGCTTAAC CGCTGAGATG CTGAATGAGT CGACTCAAAA GCGCTCAACA
GAGCAATTGT CGCAGGCGCT TGAGATGCTC GGCAGTACGG TGGACTTTAG TGCCTCCGAA
TCCCAAAGCA CGATTAAGGT GTCGGCGCTC ACCGAGCACT TGGATGAAAC CTTAGCCATA
TTGGAAGAAA AGCTGTTCCA GCCTGCGTTT AACGAGGCCG ACTTTGCGCG GGTGAAGCAG
CAACAGTTGC AGCAAATTCA GCATATGCAG TCAGACCCCG GCTATGTCGC TAACTCTGCG
CTGTATAGCT TGCTCTATGG TAAGAATAAC GCTCAAGGCG TCAGCGATGC AGGGACCTTA
GATTCCGTTG CCGCGCTGAC ACTTGCGGAT GTGAAGGCGT TTTACGCCGA ACAGTACCGT
GGTGCGAACG CTAAAATCAT TACGGTAGCG AATCTGCCTG AAAGTGCATT GCTACCCAAA
CTTGCAGGAT TGAGTCAATG GCAAGGGGAG GCGAGTAGAT TGCCGCCGCT TAAATCATTC
CCTGCGCTGA AGGGCGGGAC TATCTATCTG ATCGATAAAC CGGGCGCCGC TCAGTCGGTG
ATTAACATTG CGAAACGTGC CTTACCCTAT GATGCAACGG GTAATTATTT TAAATCTTAC
CTGATGAACT ATCCGCTCGG TGGCGCCTTC AATAGCCGTA TTAACCTCAA CCTACGTGAA
AACAAGGGGT ATACCTATGG GGCTCGCAGC TCATTTACCG GTGGCGTCGA AGTCGGTGAT
TTTGTGGCCT CGAGTGATGT GCGTACCGAT GTGACCGCCA AGGCGGTAAA TGAATTTATC
AAAGAGATCA AAGCCTATCA GCAAAATGGG ATGACAGACA CTGAGCTCGG CTTTATGCGT
AACTCGGTTT CCCAAGGGCA AGCATTGGAT TATGAGACGC CTTATCAGAA GGCGGGCTTT
ATGCGGATGA TCCAGCGTTA CCAGCTGAGC CAAGATTTTA CTACCGAGCA GGACAAAATT
ATAAATACTG TAACAAAAGA TGAACTCAAT GCCCTCGCGG CTTCCGAGCT AGATATCTCG
AAAATGATCA TCTTAGTGGT GGGAGATAAG GCGAAAATTG AAGCGGATTT AGCAACTTTA
GGCTATCCAA TTGAAACTTT AGTATTGTAA
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| Protein sequence | MYKGNTLKKW ILAVAISAAL AGCATETSTQ LPVGVKLIEN VQLTDSEVGI PFKKYQLANG
LTVILHQDHS DPLVHVDVTY HVGSARELAG RSGFAHLFEH MMFQGSEHVA DEQHFEVVTE
AGGTLNGSTN TDRTNYFETV PSNQLEKMLW LESDRMGFLL PALTSEKFEV QRETVKNERA
QRIDNQPYGR MSERFNQAMF PIGHPYSWPV IGWPEDLNRA TVDDVKHFFQ RWYGPNNATL
TIGGDFDELQ ALAWVNKYFG EIPRGPEVQP EPKTLVTLDK TRYISMEDNV HLPLIRIGFP
TVYASHPDEA ALDLLANILG GGKTSLVYKN LVKDGYAVQA SVSQPCQELA CQMSIYALAN
PQKGATLAEL EQRILDSINE FEQRGVTDDD LQKVKVQFEA DTIFGLQSVK GKVSMLALNQ
TMFGEPNKIG VDLARYANVT KDDVMRVFKK YIKDKPMVVM SVVPQGMTAL VAHPDNFTPQ
TLPVANTAVE GDLPTAKLVS SFDRSTMPAT GAAPVLKVPT IWTTKLANGI EVMGTQSSET
PTVELVIYLN GGHRLVPVEK AGLASLTAEM LNESTQKRST EQLSQALEML GSTVDFSASE
SQSTIKVSAL TEHLDETLAI LEEKLFQPAF NEADFARVKQ QQLQQIQHMQ SDPGYVANSA
LYSLLYGKNN AQGVSDAGTL DSVAALTLAD VKAFYAEQYR GANAKIITVA NLPESALLPK
LAGLSQWQGE ASRLPPLKSF PALKGGTIYL IDKPGAAQSV INIAKRALPY DATGNYFKSY
LMNYPLGGAF NSRINLNLRE NKGYTYGARS SFTGGVEVGD FVASSDVRTD VTAKAVNEFI
KEIKAYQQNG MTDTELGFMR NSVSQGQALD YETPYQKAGF MRMIQRYQLS QDFTTEQDKI
INTVTKDELN ALAASELDIS KMIILVVGDK AKIEADLATL GYPIETLVL
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