Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2980 |
Symbol | |
ID | 4253551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3558887 |
End bp | 3560536 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119616 |
Product | glutamate--cysteine ligase |
Protein accession | YP_735108 |
Protein GI | 113971315 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGATA AGCCTCAAAA TAAAGGTCTG ACTGTTAACC TTGTCGCGAT AGCGAATCAC CAATCAGAGA AGCGCAAATT GAAGCCATTC AATGAATTAG TACAACATTT CTCGGACGCT CAAGGGCGTG CCGCACTCCT TGGCATGTTA CGTGGAATTG AGCGTGAAGC GCTGCGTATC GACGAGTCAG GCTACCTTGC GTTAGATGGT CATCCATTAG AGCTTGGCTC GGCATTAACG CATTCGCGCA TTACGACAGA TTACAGTGAA GCACTGCTTG AATTTATCAC GCCGGTAAAC AATCAAGTTG GTCCCCTATT GCAAGGACTC ACCGAGACCC ATGCCTTTAG CGTGCGTCAT TTGCATGGTC AGCGCCTGTG GCCCGTGAGC ATGCCATGTT ACGTGAAGGA TGAGCAGAAT ATTCCGGTCG CCCGTTATGG CAGCTCTAAC ACGGGTAAGA TGAAAACCTT GTATCGCAAG GGCTTAACCT ACCGTTATGG TGCCTTGATG CAGATCATCT CTGGGGTGCA TTTTAACTTC TCGGTATCAC AGGAATTGTG GCAAAGCCTC TATGAGTTGA GTGACAAAAG CGTGAGCTTC GAGGATTTTA TCTCCGAATC TTACTTTGGC CTTATTCGCA ATTACCGCCG TTTAGTCTGG GTATTACCTT ATCTGTTTGG GGCATCGCCT GCGCTGTGCA GCTCCTTTAT CAAAGGGCAG AAGACCGATT TACGCTTTGA AAAATCGGGT CGCGGCACCC TGTATCTACC CTATGCGACT TCGCTGCGGA TGAGCGATCT GGGTTACACC AATAAAGAGC AGGAAGATCT TAACATTAGC TATAACTCCC TGCCCGAGTA TCTGGCTGGG GTGAGAGCCG CGATTAAGAT GCCATCGGCC AACTTTGCCA ATATCGGCGT GAAAGTGGAT GGTGAATATC GCCAGCTCAA TGCTAATGTG CTGCAAATTG AAAACGAATT TTACTCGCCT ATCCGCGCTA AGCGCGTCAC CAAAAGTGGT GAGAAGCCCT CCGAAGCCCT TGCACGTGCA GGGGTTGAGT ATATTGAGGT GCGTGCATTA GATGTGAACC CCTTCAGCCC GATTGGGATT GAAGAGAACC AAGTGCGTTT TCTCGACTTG TTCTTACTCT ATTGCTTATT AACCGAGTCG CCTAAGTCCG ATGCGGCAGA AGAAGCCCGT TTAAGTGCTA ACTTAAAATC TGTTGTGCTT GAAGGCCGTA AGCCTGGGCT CGAGTTATTA ACCGAGACAG GAACGCGTTC ACTGCAAACG TGGCTTTTGG ATCTGTTTGA GCATTTGGAT TCATTGGCTA AGTTACTCGA TGGCGATAAA CAGGAGTACC AAGCGGCCTT AGCCCATTGG CGTGAAGCCG TGAATGACCC ACAAAAGACC TTGTCTGGGC AAGTCATTCA GCAATTAATC ACCAAAGGCC AAGACCATGG ACAATGGGTG ATGTCACTGG CGCAGCAATA TCACCAATAT TTTATGGATT ACCCCTTATC GGCCGAGGTT GTCAGCGATT ATCAAGCCGA GGCGCAAGCA TCGCTTAATA AGCAAGCGGA CATCGAAGCG GTGCAAAGTG CAGTATCCTT TGATGATTAT CTGACGGACT ATTTCGGGAC TTCATCCTAA
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Protein sequence | MKDKPQNKGL TVNLVAIANH QSEKRKLKPF NELVQHFSDA QGRAALLGML RGIEREALRI DESGYLALDG HPLELGSALT HSRITTDYSE ALLEFITPVN NQVGPLLQGL TETHAFSVRH LHGQRLWPVS MPCYVKDEQN IPVARYGSSN TGKMKTLYRK GLTYRYGALM QIISGVHFNF SVSQELWQSL YELSDKSVSF EDFISESYFG LIRNYRRLVW VLPYLFGASP ALCSSFIKGQ KTDLRFEKSG RGTLYLPYAT SLRMSDLGYT NKEQEDLNIS YNSLPEYLAG VRAAIKMPSA NFANIGVKVD GEYRQLNANV LQIENEFYSP IRAKRVTKSG EKPSEALARA GVEYIEVRAL DVNPFSPIGI EENQVRFLDL FLLYCLLTES PKSDAAEEAR LSANLKSVVL EGRKPGLELL TETGTRSLQT WLLDLFEHLD SLAKLLDGDK QEYQAALAHW REAVNDPQKT LSGQVIQQLI TKGQDHGQWV MSLAQQYHQY FMDYPLSAEV VSDYQAEAQA SLNKQADIEA VQSAVSFDDY LTDYFGTSS
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