| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2976 |
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| Symbol | |
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| ID | 4253547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3555062 |
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| End bp | 3556159 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119612 |
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| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
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| Protein accession | YP_735104 |
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| Protein GI | 113971311 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000387577 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAG CAAGTGCAAA ACCTAAGGTT TGGGTATTAG GTAATGGTCA GCTCGGCGCC
ATGCTAACTC ACGCTGGCGA GCCGCTGGCT ATTGATGTTC GCGCCGTCGA TATCATGACG
CCCACCGATG AAATCCTGCC GCTGGCACCT CACGATATCA TCACCGCCGA ACGCGAGCAG
TGGCCCGAAT CCGCCCTAAG CTTACAACTC AGCACCCATC CGCATTTTGT TAACGGCCCA
GTATTTAGCC GTTTAGCTGA CCGTTATAGC CAAAAAAGCT TACTCGATCA GATCCAAGTC
CCAACCGCGC CTTGGACACT CGTAGATGAT AAGACCGACG CCGAAAACCT ATACCAAGCC
TTTGGTCCTC GCGTGCTGAT GAAGCGCCGC ACGGGTGGCT ACGACGGTAA GGGTCAACAT
TGGCTAAAAC AAGCCGAAGC GGGAGAGATC CCCCAAGATT GGCGTAACTT GGCCATTGCC
GAGCAAGCAA TTAACTTCGA TGAAGAAGTG TCCTTAGTCG GCGTACGTAC CCGTGAAGGT
CAATGCGTGT TTTATCCATT AACACTTAAC CTGCATCAAG ACGGCATTTT GATGGCATCG
ATTTCGCCAC TGACTCGTCT GAATCACCTG CAAGCACAAG CGGAAGGCAT GCTGAGCGCT
ATTATGCATG AGCTGGAATA TGTCGGCGTG ATGGCGATGG AATGTTTCCG AGTTGGCGAT
AAGCTGCTGG TTAACGAGTT AGCCCCGCGG GTGCACAACT CTGGCCATTG GACCCAAGCG
GGTACCCATA TGGATCAATT CCAACTGCAT TTAAGAGCCC TGTGCGGCAT TGCTATTCCG
CAGCCACAGG TAAACTTTCA ATGCGTGATG GTCAACCTGA TTGGTATCGA TAACGATACC
CGTTGGTTAA GCCTGCCTAA TGCCGAGCTT TATTGGTACA ACAAAGAAGT GCGATCTGGC
CGTAAAGTCG GGCACTTAAA TCTTTCGGTA CCTAATCTTG CCGTGTTAAA AGACAGCATT
GGCGCACTAC AAACTTGGAT GCCAAGCCAA TATCAAGCGC CCCTCGCGTG GATTTTAGCA
GAGTTTGCTA AAGACTAA
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| Protein sequence | MTQASAKPKV WVLGNGQLGA MLTHAGEPLA IDVRAVDIMT PTDEILPLAP HDIITAEREQ
WPESALSLQL STHPHFVNGP VFSRLADRYS QKSLLDQIQV PTAPWTLVDD KTDAENLYQA
FGPRVLMKRR TGGYDGKGQH WLKQAEAGEI PQDWRNLAIA EQAINFDEEV SLVGVRTREG
QCVFYPLTLN LHQDGILMAS ISPLTRLNHL QAQAEGMLSA IMHELEYVGV MAMECFRVGD
KLLVNELAPR VHNSGHWTQA GTHMDQFQLH LRALCGIAIP QPQVNFQCVM VNLIGIDNDT
RWLSLPNAEL YWYNKEVRSG RKVGHLNLSV PNLAVLKDSI GALQTWMPSQ YQAPLAWILA
EFAKD
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