Gene Shewmr4_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2963 
Symbol 
ID4253534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3538496 
End bp3539269 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID638119599 
Producthypothetical protein 
Protein accessionYP_735091 
Protein GI113971298 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0521489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.778941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTT TGGTTTCACC GGCGAAAACC CTAGATTTTG AGCAACCTCC TTTGACTCAA 
ACCCATACTC GGCCCGATTT TTTAGCTTAT AGCCAAGAAC TCATTCAAGT CTGCCAACGG
TTAACCCCGA GTGACATTGC AACATTAATG AAGGTGAGCG ATAACATCGC GGGCTTAAAT
GCCGCGCGTT TTGGTGAGTG GACACCCGAC TACAGTATTG CCAACGCCAA ACAGGCGATT
TTTGCTTTTC GGGGGGATGT GTATACGGGG GTTGATGCCG ATACGTTGAC GCCTGAACAG
CTCGAACGTA CCCAGTCACA ATTGCGTATT TTATCTGGGC TCTATGGTTT ACTGCGACCC
TTGGATTTGA TTTTACCTTA CCGTTTAGAA ATGGGGACTG CGCTTGCCAA TCCTAAAGGT
AAGAATCTCT ACGATTTCTG GGGCAATATT CTCACCGAAG CGGTCAATCG TGCCGTTGCA
GAGCAGGGGG ATGAGCTGAT AATTAACCTT GCATCGAATG AATATTTTAA AGCGGTTAAA
CCAAAGCAAT TAACTGGGCA ATTAATCACT CCAGTATTTA AAGATTTTAA AAATGGCCAA
TATAAAGTCA TCAGTTTCTT TGCGAAAAAA GCGCGGGGAA TGATGGCAAG ATATATCATT
GATCAGCAAG TCAGTTCGAT TGATGAATTA AAAGCGTTTG ATGTGGCCGG TTATTACTAC
AGTGAAGAAT TGAGTAAACC GAATGAGCCA ACATTCTTGC GTGAAGCGCA GTAA
 
Protein sequence
MLILVSPAKT LDFEQPPLTQ THTRPDFLAY SQELIQVCQR LTPSDIATLM KVSDNIAGLN 
AARFGEWTPD YSIANAKQAI FAFRGDVYTG VDADTLTPEQ LERTQSQLRI LSGLYGLLRP
LDLILPYRLE MGTALANPKG KNLYDFWGNI LTEAVNRAVA EQGDELIINL ASNEYFKAVK
PKQLTGQLIT PVFKDFKNGQ YKVISFFAKK ARGMMARYII DQQVSSIDEL KAFDVAGYYY
SEELSKPNEP TFLREAQ