Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2963 |
Symbol | |
ID | 4253534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3538496 |
End bp | 3539269 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638119599 |
Product | hypothetical protein |
Protein accession | YP_735091 |
Protein GI | 113971298 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0521489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.778941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATTT TGGTTTCACC GGCGAAAACC CTAGATTTTG AGCAACCTCC TTTGACTCAA ACCCATACTC GGCCCGATTT TTTAGCTTAT AGCCAAGAAC TCATTCAAGT CTGCCAACGG TTAACCCCGA GTGACATTGC AACATTAATG AAGGTGAGCG ATAACATCGC GGGCTTAAAT GCCGCGCGTT TTGGTGAGTG GACACCCGAC TACAGTATTG CCAACGCCAA ACAGGCGATT TTTGCTTTTC GGGGGGATGT GTATACGGGG GTTGATGCCG ATACGTTGAC GCCTGAACAG CTCGAACGTA CCCAGTCACA ATTGCGTATT TTATCTGGGC TCTATGGTTT ACTGCGACCC TTGGATTTGA TTTTACCTTA CCGTTTAGAA ATGGGGACTG CGCTTGCCAA TCCTAAAGGT AAGAATCTCT ACGATTTCTG GGGCAATATT CTCACCGAAG CGGTCAATCG TGCCGTTGCA GAGCAGGGGG ATGAGCTGAT AATTAACCTT GCATCGAATG AATATTTTAA AGCGGTTAAA CCAAAGCAAT TAACTGGGCA ATTAATCACT CCAGTATTTA AAGATTTTAA AAATGGCCAA TATAAAGTCA TCAGTTTCTT TGCGAAAAAA GCGCGGGGAA TGATGGCAAG ATATATCATT GATCAGCAAG TCAGTTCGAT TGATGAATTA AAAGCGTTTG ATGTGGCCGG TTATTACTAC AGTGAAGAAT TGAGTAAACC GAATGAGCCA ACATTCTTGC GTGAAGCGCA GTAA
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Protein sequence | MLILVSPAKT LDFEQPPLTQ THTRPDFLAY SQELIQVCQR LTPSDIATLM KVSDNIAGLN AARFGEWTPD YSIANAKQAI FAFRGDVYTG VDADTLTPEQ LERTQSQLRI LSGLYGLLRP LDLILPYRLE MGTALANPKG KNLYDFWGNI LTEAVNRAVA EQGDELIINL ASNEYFKAVK PKQLTGQLIT PVFKDFKNGQ YKVISFFAKK ARGMMARYII DQQVSSIDEL KAFDVAGYYY SEELSKPNEP TFLREAQ
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