| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2960 |
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| Symbol | rpsT |
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| ID | 4253531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3536259 |
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| End bp | 3536525 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119596 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_735088 |
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| Protein GI | 113971295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000020022 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.711019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCTAATA GCAAGTCTGC AAAGAAGCGC GCGCTTCAAT CTGAAAAGCG TCGTCAGCAC
AACGCCAGCC GTCGCTCAAT GTTACGTACA TACGTTAAAA AAGTTATCGC TGCTATCAAA
GCTGGCGATC ACAAAACAGC AACCGAAGCT TTCGCTGCTG CACAACCAAT CGTTGACCGT
ATGGCGACTA AAGGCCTTAT TCACAAGAAT AAAGCTGCCC GTCATAAGGC TCGTTTGAAT
GCTAAGATCA AAGCACTAGC TGCTTAA
|
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| Protein sequence | MANSKSAKKR ALQSEKRRQH NASRRSMLRT YVKKVIAAIK AGDHKTATEA FAAAQPIVDR
MATKGLIHKN KAARHKARLN AKIKALAA
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