| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2943 |
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| Symbol | |
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| ID | 4253514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3517830 |
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| End bp | 3518846 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638119579 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_735071 |
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| Protein GI | 113971278 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.318917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA CTATCAACGA CGTCGCTAAA TATGCTGGAG TGTCAATCAA GACAGTTTCC
CGCGTAACCA ATAACGAACC TTCGGTAAAA CAAGCCACGG TTGATAAAGT GAACGAGGCC
ATCAAGGCAT TAAACTACCA GCCCAATCTC GCGGCCAGAA ACCTTGCTGG CACAAAATCC
TATGCCATTG GTTTTATTTA TGATAATCCC AACGCTTATT ACATTATTGA TATGCAAAAC
GGGATTTTGT CGGCCTGTAA AGATAAAGGC TATGAGCTGG TTATTCATCC TTGTAACGCC
AAATCTGACA CCATTTGTGA TGAACTGACT CAACTCGTGA AACATTCGCG ACTGGCTGGT
TTAGTGTTAA CACCGCCTCT TTCTGAAGAT CCTAAAGTAC TTAAAGCCTT AAGTGATATT
GAGGCCAACT ATGTGCGAAT TATTGCCGGC GAAGGTAATA AGGAGCAGGA TGGACTGACG
ATTTTAGTCA ATGACAAATT TGGTGCGGTT GAGATTACTC AGCATTTGAT CGACTTAGGC
CATAAAGAAA TTGCCTTTTT AAGTGGTGAT CTACACCACG AGTCTACCAA AGAGCGGTTA
CTTGGTTATA AACAAGCATT AACAAAAAAT CGCCTGCTTC TGAATGAAGA TTACATAATT
GAAGGAAAAT ATTCATTTGA GTCGGGTGTA GAAGGGGCTA ACACCCTGAT CAAACAGAAG
AACCGTCCAA CAGCGATTGT TGCCTGTAAC GACGAAATTG CAGCAGGGGC ACTTTTTGCT
GCTCGTTTAG CAGGGCTAGA TATCCCTGGC GATCTATCCA TTGTCGGCTT CGAAGACAGC
CCATTCTCAC GCCAAACCTG GCCAAAACTA ACAACAGTGC ATCAACCTAA CGCTGAAATT
GCCCAAGTGG CAACAGAGCT GTTAATCGCG AAACGCCGTG AACAAGATGC CAAGTTTGCA
AAAACATTTA CGCCAGAGCC AGTGATCCGA GACTCTTCAG CCTCTCCCAA ACATTAA
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| Protein sequence | MKVTINDVAK YAGVSIKTVS RVTNNEPSVK QATVDKVNEA IKALNYQPNL AARNLAGTKS
YAIGFIYDNP NAYYIIDMQN GILSACKDKG YELVIHPCNA KSDTICDELT QLVKHSRLAG
LVLTPPLSED PKVLKALSDI EANYVRIIAG EGNKEQDGLT ILVNDKFGAV EITQHLIDLG
HKEIAFLSGD LHHESTKERL LGYKQALTKN RLLLNEDYII EGKYSFESGV EGANTLIKQK
NRPTAIVACN DEIAAGALFA ARLAGLDIPG DLSIVGFEDS PFSRQTWPKL TTVHQPNAEI
AQVATELLIA KRREQDAKFA KTFTPEPVIR DSSASPKH
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