Gene Shewmr4_2932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2932 
Symbol 
ID4253503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3501153 
End bp3502340 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content50% 
IMG OID638119568 
Producthypothetical protein 
Protein accessionYP_735060 
Protein GI113971267 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000352227 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.983866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGA CTGCGCCGGG ATCTGTCGCC AATACGGGCG TGAATGCTCA GGATGCTGCC 
GCGAAAAAGA GTCAGTCAAA ACCGCGGTTG ATGTCCCTCG ATGCCTTGCG CGGCTTCGAC
ATGTTTTGGA TTTTAGGTGG TGAAGCCCTA TTTGGCGCCT TGCTTATCTT GACGGGCTGG
GCTGGCTGGC AATGGGGTGA TACCCAAATG CACCATAGCG AGTGGAATGG GTTTCGCTTC
TATGATTTGA TTTTTCCGCT GTTTATTTTT CTCTCTGGTG TTGCGCTTGG ATTATCGCCA
AAACGCTTAG ATAAACTACC AATGCATGAG CGTATGCCTG TGTATCGCCA CGGGATTAAG
CGACTGTTTC TTTTGTTGTT GCTGGGCATT CTTTACAACC ATGGTTGGGG AACGGGGGTG
CCTGCCGATC CTGAGAAAGT CCGTTATGCC AGCGTCTTAG GTCGAATTGC CTTTGCGTGG
TTTTTTGCCG CCTTGTTGGT GTGGCATACC AGTTTGAGGA CCCAAGTGCT GGTGGCCTTG
GGCATATTAG TGGCCTATGG CGCGATGCAA CTCTGGTTGC CGTTTCCTGG TGGACAGGCT
GGAGTGTTAT CACCCACTGA GTCAATCAAT GCTTATGTGG ATAGCCTTTT ATTGCCAGGT
GTGAGTTATC AAGGACGAAC GCCCGATCCT GAAGGCGTGT TATCGACACT GCCCGCCGTA
GTCAACGCCT TAGCGGGTGT GTTTGTCGGT CACTTTATTG TGAAATCCCA TCCAAAAGGG
GAGTGGGCTA AGGTTGGCTT ATTGAGCGTT GCTGGTGGTG TTTGTTTGGC CCTAGGCTGG
TTGCTGGATG GGGTTATTCC CGTCAATAAA GAGCTGTGGA CAAGCTCATT TGTATTGGTC
ACTAGCGGTT GGAGCATGCT GCTGTTAGCG CTGTTTTATG CCCTAGTGGA TGTGCTCAAA
TGGCAAAAGC TCACCTTTAT TTTTGTGGTG ATAGGCACTA ACGCCATCAT TATTTATTTG
GCCTCTAGTC TGGTGGATTG GAAGTATATC GCCCAGAGTG TGTTCGGTGG CGTTATCGCG
GCATTACCAG AAAATGCTCA GCCCTTAGCG GCCGTGATTG GTTTGCTCAC CGTTCAATGG
TTAGTGCTGT ATTGGATGTA TCGTCGCAAT ATTTTTGTGC GGATCTAA
 
Protein sequence
MSTTAPGSVA NTGVNAQDAA AKKSQSKPRL MSLDALRGFD MFWILGGEAL FGALLILTGW 
AGWQWGDTQM HHSEWNGFRF YDLIFPLFIF LSGVALGLSP KRLDKLPMHE RMPVYRHGIK
RLFLLLLLGI LYNHGWGTGV PADPEKVRYA SVLGRIAFAW FFAALLVWHT SLRTQVLVAL
GILVAYGAMQ LWLPFPGGQA GVLSPTESIN AYVDSLLLPG VSYQGRTPDP EGVLSTLPAV
VNALAGVFVG HFIVKSHPKG EWAKVGLLSV AGGVCLALGW LLDGVIPVNK ELWTSSFVLV
TSGWSMLLLA LFYALVDVLK WQKLTFIFVV IGTNAIIIYL ASSLVDWKYI AQSVFGGVIA
ALPENAQPLA AVIGLLTVQW LVLYWMYRRN IFVRI