| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2931 |
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| Symbol | |
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| ID | 4253502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3499515 |
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| End bp | 3500813 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119567 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_735059 |
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| Protein GI | 113971266 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000470631 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.974041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCG ATAAAAGCCA GCAGAAAAGC AGTTTTCTCC CCATGGCGAT AGTGGCAGCA
CTCTTTTTCA TCCTCGGATT CGCAACGTGG TTGAATGGAT CTTTGATGCC CTATTTAAAA
CAAATTTTGC AACTCAATCC CTTCCAAGCC TCATTAATCC TGTTCTCTTT CTACATTGCA
GTGACTTTTA CCGCGCTACC TTCGGCGTGG GTGATCCGTA AAGTGGGTTA TAAAAATGGT
ATGGCACTGG GGATGGGCAT CATGATGCTC GCCGGCTTAC TGTTTATTCC TGCGGCTAAA
ACCCAAATAT TTGGTCTGTT TTTATGTGCG CAATTAGTGA TGGGCACAGG CCAAACCTTG
TTGCAAACTG CGGTCAATCC CTACGTGGTT CGCCTTGGAC CGGAAGAGTC TGCTGCGGCC
CGAGTGAGCG TGATGGGCAT TTTGAATAAA GGTGCAGGGG TGATTGCACC CTTAGTTTTC
TCTGCATTGA TTTTAGATAG CTTTAAAGAC CGCATTGGGA CTACGTTAAC CCAAGTGCAA
ATTGATGAAA TGGCAAACAG CTTGGTTTTC CCTTACCTCG GTATGGCGAT TTTTATTGGG
GTGTTGGCAC TTGCTGTAAA AAAATCTCCA CTGCCAGAAC TCTCTAATGA AGATGAAGTG
GCCGAGCACA CTGATAAAGG CCAAATCAAA GCGGCCTTAT CCCATCCTAA CCTTGCATTT
GGGGTTATCG CGCTATTTGT GTACGTTGCC GTTGAGGTGA TTGCCGGCGA CACTATCGGT
ACCTTTGCCT TATCGCTCGG GGTTGAACAT TACGGTGTGA TGACCTCATA CACTATGGTG
TGTATGGTTC TGGGTTATAC CTTAGGGATT ATCCTGATCC CTCGCTTTAT CTCTCAGCCA
ACGGCACTGA TGATTTCGGC GATTCTTGGC CTATTACTGA CCCTAGCCAT ACTGTTTGGG
GATAACCATT CCTACGCGAT TGCCAATGTG CTGTTAGTGC CTTTCGGCGG GGTGGCCTTG
CCTGATACCT TACTCTTCAT TGCCTTCTTA GGATTAGCCA ATGCGATTGT TTGGCCTGCG
GTGTGGCCTC TGGCACTGTC GGGTTTAGGT AAGCTCACCA GCACAGGTTC GGCATTACTC
ATCATGGGGA TTGCGGGTGG TGCTTTCGGT CCACTGTTTT GGGGACTCAC GAGTTCGGCC
ACCGATATGG GGCAGCAGGG CGGTTATATG GTGATGTTAC CTTGTTACCT GTTTATTCTC
TTCTATGCCG TGAAAGGCCA TAAGATGCGT CACTGGTAA
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| Protein sequence | MTLDKSQQKS SFLPMAIVAA LFFILGFATW LNGSLMPYLK QILQLNPFQA SLILFSFYIA
VTFTALPSAW VIRKVGYKNG MALGMGIMML AGLLFIPAAK TQIFGLFLCA QLVMGTGQTL
LQTAVNPYVV RLGPEESAAA RVSVMGILNK GAGVIAPLVF SALILDSFKD RIGTTLTQVQ
IDEMANSLVF PYLGMAIFIG VLALAVKKSP LPELSNEDEV AEHTDKGQIK AALSHPNLAF
GVIALFVYVA VEVIAGDTIG TFALSLGVEH YGVMTSYTMV CMVLGYTLGI ILIPRFISQP
TALMISAILG LLLTLAILFG DNHSYAIANV LLVPFGGVAL PDTLLFIAFL GLANAIVWPA
VWPLALSGLG KLTSTGSALL IMGIAGGAFG PLFWGLTSSA TDMGQQGGYM VMLPCYLFIL
FYAVKGHKMR HW
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