Gene Shewmr4_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2929 
Symbol 
ID4253500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3498178 
End bp3498543 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content48% 
IMG OID638119565 
Productprotein of unknown function DUF861, cupin_3 
Protein accessionYP_735057 
Protein GI113971264 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000538599 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA GCGTAACCTC GATCATTCGC TTTGCCAGCG CACAGTCGCC GGTGGAAAGT 
TATCAAGTCG CCCCAGAAAA GCGCATCTCT GGTAACCCCA CCCAGCAATT ACAGAATCAT
TACTCTAGCC CCTGTAATCA ATTCCATAGT GGAATTTGGC AAAGCGAATC AGGTGCTTGG
AAAATCAACT ACACTGAATA CGAGTATTGC GAGATCCTCG AAGGGACCAG CGTCATCACA
GATCTTGAGG GACAGTCACA AACCTTCAGT GTCGGCGACC GATTTATTAT TCCTGCGGGG
TTTCAAGGGG TGTGGCAAGT CGTTGAACCG TGTCGCAAGG TTTATGTCAT CTTCGAACAA
AAGTGA
 
Protein sequence
MTMSVTSIIR FASAQSPVES YQVAPEKRIS GNPTQQLQNH YSSPCNQFHS GIWQSESGAW 
KINYTEYEYC EILEGTSVIT DLEGQSQTFS VGDRFIIPAG FQGVWQVVEP CRKVYVIFEQ
K