| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2921 |
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| Symbol | |
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| ID | 4253492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3489209 |
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| End bp | 3489835 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119557 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_735049 |
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| Protein GI | 113971256 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG1396] Predicted transcriptional regulators
[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.899455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTTGGGA TGATGTTTAT CCTGAACAAC CTGTTCTTCA TCTATCGGGG CAACCGATCC
TTTGGGGAGA TGCGAAATTT GGATATTGGA GCCAGTCTCA GAACTGTTCG AAAAATGAAA
GGCTTATCCC AGCGTGAGCT GGCTAAGCGT GCTGGTGTGA CTAACAGTAC AATTTCAATG
ATCGAAAAAA ACAGTGTTAG CCCATCCGTC AGTTCTTTGA AAAAGGTATT GTCGGGTATC
CCTATGTCTT TAGTGGATTT TTTCTCGATT GAAGCCTCGA TTGAGAGTGA GCAAAAAGTA
GTTTATCGCT CCGATGAACT CCTCGATATA GGTACAGGGC CGTTAGAATT TAAGTTGATT
GGCCGCGACT TTCCCAATCG TGCCATGTCG GTGATGAGTG AAACCTACCC ACCGGGTTCG
GATACGGGCG AGGAAATGCT GAAACACGAA GGTGAAGAGG CGGCCATGGT GATCGAAGGC
AAATTCGAAC TGACCGTTGG CGATGAGGTT TATATCTTAG AAGCGGGTGA TAGTTACTAT
TTTAACAGTG AATTACCCCA TAGATTTCGT AACCCTTTCG ATGAACCCTG TCGACTGGTC
AGTGCAACAA CGCCAGCGAA TTTCTAA
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| Protein sequence | MFGMMFILNN LFFIYRGNRS FGEMRNLDIG ASLRTVRKMK GLSQRELAKR AGVTNSTISM
IEKNSVSPSV SSLKKVLSGI PMSLVDFFSI EASIESEQKV VYRSDELLDI GTGPLEFKLI
GRDFPNRAMS VMSETYPPGS DTGEEMLKHE GEEAAMVIEG KFELTVGDEV YILEAGDSYY
FNSELPHRFR NPFDEPCRLV SATTPANF
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