| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2917 |
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| Symbol | |
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| ID | 4253488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3483685 |
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| End bp | 3484821 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119553 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_735045 |
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| Protein GI | 113971252 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0239568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.458628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCA CCTCGGGCGT CACCAACAAA CCCACTACAA AGACGCAAGA AAAAGTCCTG
CTTAAGATTG AGCGGGTCAG TAAATTGTTC GACGATGTAC GCGCGGTTGA CGACGTATCA
TTGACGATTA ATAAAGGTGA GATTTTTGCT TTACTTGGGG GCTCTGGCTC GGGTAAGTCG
ACCTTATTAC GTATGCTCGC GGGGTTCGAG AGACCGACCT CTGGACGGAT TTTTCTCGAT
GGTGAAGATA TTACCGATTT GCCACCCTAC GAACGTCCCA TCAACATGAT GTTCCAGTCT
TATGCGCTCT TTCCCCATAT GACGGTCGCG CAAAATATCG CCTTCGGTTT AAAGCAAGAT
AAGTTACCCA AAGCGGAAAT TGAGCAAAGG GTGCAAGAAA TGCTCAAGTT GGTGCATATG
GAGCAATATG GCAAACGTAA GCCGCATCAG CTTTCCGGTG GTCAACGTCA ACGGGTGGCG
TTAGCCCGCT CCCTCGCGAA ACGTCCTAAA TTATTGCTGC TCGATGAGCC TATGGGCGCA
CTGGATAAAA AGCTGCGTAC TCAAATGCAG TTAGAAGTGG TTGAGATTCT TGAACGTGTT
GGCGTGACCT GTGTAATGGT GACCCATGAT CAGGAAGAGG CCATGACCAT GGCGGGCCGC
ATTTCGATTA TGAGCGACGG TTGGATTGCC CAAACTGGCT CACCTATGGA CATTTACGAG
AGTCCTAACA GCCGCATGAT TGCCGAATTT ATCGGTTCAG TGAACCTCTT TGGCGGCGAG
ATTGAAGTGG ACGAAGTCGA CCACCTCATC ATTAAACCCA ATGATTTAGC CCAGCCCTTC
TATGTGGGTT ACGGCGTAAC GACCAGCGCC GAAGAAAAGC ATGTGTGGTT AGCGGTACGC
CCCGAAAAAA CCATTATCAG CCGCGAGCAA CCCGAGGGCG AGTACAACTG GGCCAAGGGC
ATTGTGCATG ACATCGCCTA CTTAGGTGGC ATTTCGGTGT ACTACATTCG CCTCGAAAAC
GGCCAAATAG TGCAATGCAG TATGACCAAC CGTGAACGCC GTGCCGACCA TGCGACATGG
GATGATGAAG TGTTCATCAG CTGGGAGGAC ACCAGTGGCG TGGTGTTAAG ATCATGA
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| Protein sequence | MASTSGVTNK PTTKTQEKVL LKIERVSKLF DDVRAVDDVS LTINKGEIFA LLGGSGSGKS
TLLRMLAGFE RPTSGRIFLD GEDITDLPPY ERPINMMFQS YALFPHMTVA QNIAFGLKQD
KLPKAEIEQR VQEMLKLVHM EQYGKRKPHQ LSGGQRQRVA LARSLAKRPK LLLLDEPMGA
LDKKLRTQMQ LEVVEILERV GVTCVMVTHD QEEAMTMAGR ISIMSDGWIA QTGSPMDIYE
SPNSRMIAEF IGSVNLFGGE IEVDEVDHLI IKPNDLAQPF YVGYGVTTSA EEKHVWLAVR
PEKTIISREQ PEGEYNWAKG IVHDIAYLGG ISVYYIRLEN GQIVQCSMTN RERRADHATW
DDEVFISWED TSGVVLRS
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