| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2915 |
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| Symbol | |
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| ID | 4253486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3481971 |
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| End bp | 3482786 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119551 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_735043 |
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| Protein GI | 113971250 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.024318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.589307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TGAGTTTTTC TTCGGTGATG CTGTGGTTCG GCTTGTTCTT CTTGTACGCA
CCTATGTTGA TCCTAGTGAT TTATTCTTTT AACGAATCTA AGTTAGTGAC AGTGTGGGGC
GGGTTTTCAC CTAAATGGTA CGGCGAGTTA TTTGCCGATC AGCAAATTCT CGATGCGGTG
TGGACCAGCC TTAGGATTGC GTTTTACAGC TCAACCATGG CGGTGATTAT CGGCACTATG
GCCGCCTTTG TGATGACGCG ATTTAAGCGC TCTTGGGCCA AGCTCACTTT GTCGAACATG
ATCACCGCGC CTTTGGTTAT GCCTGAGGTG ATCACGGGTC TGTCATTGCT ACTGTTATTT
GTGCATATGG CGGATCTCTT AGGTTGGCCG AAAGAGCGCG GCATGGTGAC CGTTTGGATT
GCCCACTCGA CCTTCTGCGC GGCCTATGTG GCTGTGGTGG TGTCGTCAAG ATTGCGTGAG
TTAGACATGT CAATCGAAGA GGCGGCAATG GATTTAGGTG CAACGCCGCT TAAGACCTTC
TTCCTGATCA CTGTGCCCAT GATTTCACCG GCATTAGTGG CGGGCTGGTT GTTATCCTTT
AGTCTATCAC TCGATGACTT AGTGATCGCA AGCTTTGCCT CAGGCCCAGG CGCGACCACT
TTACCTATGG TGGTGTTCTC CTCGGTGCGT TTGGGGGTAT CGCCTAAGAT CAACGCCTTG
GCAACACTGA TCATTCTATG TGTATCGTTA ATCGCCTTCT TGTCTTGGTA TATGGCAAGA
CGCGCCGAAA AACGTGAGCG TATGCCGCTT AACTAA
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| Protein sequence | MKKLSFSSVM LWFGLFFLYA PMLILVIYSF NESKLVTVWG GFSPKWYGEL FADQQILDAV
WTSLRIAFYS STMAVIIGTM AAFVMTRFKR SWAKLTLSNM ITAPLVMPEV ITGLSLLLLF
VHMADLLGWP KERGMVTVWI AHSTFCAAYV AVVVSSRLRE LDMSIEEAAM DLGATPLKTF
FLITVPMISP ALVAGWLLSF SLSLDDLVIA SFASGPGATT LPMVVFSSVR LGVSPKINAL
ATLIILCVSL IAFLSWYMAR RAEKRERMPL N
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