| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2911 |
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| Symbol | |
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| ID | 4253482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3476422 |
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| End bp | 3477468 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638119547 |
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| Product | luciferase family protein |
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| Protein accession | YP_735039 |
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| Protein GI | 113971246 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.425969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAT CATCCACTTC AACATCAGCA GCCCCCATAT CTCAGGCAAA GTCTCCCCTG
GCGGATATTC CCTTTTCACT CTTAGAACTC GCCCCCGTAC GTCAAGGCGC CAGCATCGGA
GACACGCTAC GCGCAAGCCT GCAATACGCT AAGGTTGCCG ATGAGTTAGG TTTTAATCGA
TTCTGGTTTG CCGAGCACCA CAATATGCTC GGTATCGCCA GCGCCGCGAC ATCGGTATTA
ATTGGCTATA TTGCCGAGAA TACTAAGCGC ATTCGCGTCG GCGCGGGTGG GATTATGCTG
CCCAACCATG CGCCCTTAGT GGTTGCCGAG CAGTTTGGTA CGCTCGAAAG TCTTTATCCT
GGGCGTATCG ATTTAGGGCT TGGCCGCGCT CCTGGGAGCG ATCAAATCAC CAGCCGCGCC
CTTAACCGCG ATATGAGCCG CGCGGAGCAA TTTCCCGCCG AGGTGAGCGA GTTACAAACT
TTGCTCGGCG ACTACAGTGG CCATCATCCC GTAAGAGCGA TTCCCGGCGA AGGCACCCAT
GTACCGATTT GGCTACTCGG CTCTAGCCTG TTTAGCGCCC AGCTTGCGGC ACAGCGCGGC
TTACCCTATG TCTTTGCAGG GCATTTTGCG CCAAGATTCC TCTACGATGC GATTGAGATT
TACCGCCGCG ACTTTAAGCC ATCTAAGGTG TTGGATAAGC CCTATGTTAT GCTTGGCCTG
CCGCTAATCG CTGCCGAGAC GGACGCCGAA GCCGAATACC TGAGCACCAC CTCCAAGCAA
CGGGTACTTG CGCTGATCCG TGGTGAGGCT CTGTGGTTAA AACCGCCCGT GAACAGCATG
GATGGCCTGT GGAGCGAGCA GGAAAAAACC TATGTCGATA ACTTCTTAGG CTTATCCGTC
ACTGGTGGCC CCACCGCCAT CAAGCACCGC TTAGAGATGA TAGTGAAAGA GCTGGGTGTC
GATGAGTTTA TCTTTACCAA CGATTTGTAT GATCAGGACA AACGTGAGCG TGCACTGCAA
ATCCTGATGG AGATAAAAGG CTCTTAA
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| Protein sequence | MSISSTSTSA APISQAKSPL ADIPFSLLEL APVRQGASIG DTLRASLQYA KVADELGFNR
FWFAEHHNML GIASAATSVL IGYIAENTKR IRVGAGGIML PNHAPLVVAE QFGTLESLYP
GRIDLGLGRA PGSDQITSRA LNRDMSRAEQ FPAEVSELQT LLGDYSGHHP VRAIPGEGTH
VPIWLLGSSL FSAQLAAQRG LPYVFAGHFA PRFLYDAIEI YRRDFKPSKV LDKPYVMLGL
PLIAAETDAE AEYLSTTSKQ RVLALIRGEA LWLKPPVNSM DGLWSEQEKT YVDNFLGLSV
TGGPTAIKHR LEMIVKELGV DEFIFTNDLY DQDKRERALQ ILMEIKGS
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