| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2904 |
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| Symbol | |
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| ID | 4253475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3465690 |
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| End bp | 3466706 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638119539 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_735032 |
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| Protein GI | 113971239 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000983109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0445354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTTC TAGGTATTGA GACATCTTGT GACGAGACAG GTATTGCCGT CTATGACGAT
AAGCTGGGGT TACTCTCCCA TGCTTTATAT AGTCAGGTTA AGTTGCATGC GGATTATGGT
GGGGTAGTGC CTGAACTGGC TTCCCGCGAC CATGTGCGCA AAATTGTCCC GCTGATCCGC
CAAGCGTTGA AAAACGCCAA TACCGAGATT GCCGATTTAG ATGGCATTGC CTACACCAAA
GGCCCTGGCC TTATCGGTGC TTTATTAGTG GGCGCTTGTG TTGGCCGCTC ACTTGCCTTT
GCTTGGAACA AGCCCGCCAT CGGTGTGCAT CATATGGAAG GGCATCTGCT GGCGCCAATG
CTGGAAGACG ATGCGCCTGA GTTTCCCTTT GTTGCACTAT TAGTATCAGG TGGCCACTCT
ATGTTAGTAA AGGTTGATGG CATCGGCCTT TATGAAGTTT TAGGTGAGTC GGTGGATGAT
GCCGCCGGTG AAGCCTTCGA CAAAACCGCT AAGCTAATGG GGCTGGATTA CCCCGGCGGT
CCACGGCTTG CGAAACTGGC CGCCAAAGGT GAGCCTGCAG GTTATCAATT TCCGCGGCCA
ATGACCGATA GACCCGGGCT CGATTTTAGC TTCTCAGGCC TGAAAACCTT TACCGCCAAT
ACCATTGCCG CCGAGCCAGA TGATGAGCAA ACCCGCGCCA ACATCGCCCG AGCCTTTGAA
GAAGCGGTTG TGGATACCCT CGCGATAAAA TGTCGCCGCG CGTTAAAACA AACGGGCTAT
AACCGTTTAG TGATCGCGGG TGGCGTGAGC GCCAACACAC GCTTACGGGA AACCTTGGCC
GAGATGATGA CCTCTATCGG TGGCCGAGTT TATTATCCTC GCGGCGAGTT TTGTACTGAC
AACGGCGCCA TGATTGCTTT CGCTGGCCTG CAGCGTTTAA AGGCGGGGCA GCAGGAAGAC
TTAGCGGTCA AAGGTCAACC GAGATGGCCG CTCGATACCT TACCGCCAGT TGCGTGA
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| Protein sequence | MRVLGIETSC DETGIAVYDD KLGLLSHALY SQVKLHADYG GVVPELASRD HVRKIVPLIR
QALKNANTEI ADLDGIAYTK GPGLIGALLV GACVGRSLAF AWNKPAIGVH HMEGHLLAPM
LEDDAPEFPF VALLVSGGHS MLVKVDGIGL YEVLGESVDD AAGEAFDKTA KLMGLDYPGG
PRLAKLAAKG EPAGYQFPRP MTDRPGLDFS FSGLKTFTAN TIAAEPDDEQ TRANIARAFE
EAVVDTLAIK CRRALKQTGY NRLVIAGGVS ANTRLRETLA EMMTSIGGRV YYPRGEFCTD
NGAMIAFAGL QRLKAGQQED LAVKGQPRWP LDTLPPVA
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