Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2897 |
Symbol | |
ID | 4253468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3459636 |
End bp | 3460886 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119532 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_735025 |
Protein GI | 113971232 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000147778 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00074831 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAATTT ATTTAGTGGG CGGAGCTGTA CGAGACAGTC TGCTCAATCT CCCAATAAAA GATAAAGATT TTATGGTTGT TGGCGCCACT CCGGAGCAAA TGCTGCAATT AGGCTATCGC CAGGTGGGTA AAGACTTCCC AGTCTTTTTG CACCCTAAAA CCCAACAAGA ATATGCTTTA GCGCGAACGG AGCGCAAAGT CGGCCTAGGC TATGGCGGTT TTAGCTGTTA TGCCAGTCCG GAGGTCACCC TAGAGCAAGA CCTACTGAGA CGTGATTTAA CCATTAATGC CATAGCTCAA GATGAGGCGG GTAATTTACA CGATCCTTTT CATGGTATCG CGGACATAGA GGCACGACAG CTGCGGCATG TTTCGGCAGC CTTTTCAGAA GATCCACTGA GAGTATTACG GGTTGCCCGT TTTGCCGCAC GTTTTCATGG ATTAGGTTTC GAGATTGCCC CAGAAACCAT GGCGTTAATG CAGCACATGA GTCAAACCGA AGAGTTAACC GCACTCACGC CTGAACGCGT CTGGCAAGAA GTCGATAAGA GTCTTGGCGG TCCTCACCCA GAAGTCTTCT TCGAAGTGCT ACGCCAATGT GGCGCCTTGA AAGTCCTCTT TCCCGAGATT GATGCGCTGT TTGGCGTCCC TCAGCCTGAA AAATGGCACC CAGAAATAGA TACGGGTTTG CACACTATGA TGGTATTAGC CCAGTCCTCA TCCATGACAG AGGAAAAAGC CGTGCGCTTC GCCGCCTTAG TGCACGATCT AGGTAAAGCA TTAAGCCCCA AAGAACACTG GCCTAAACAC CATGGCCATG GGCAAAAAGG ACTGCCAGTG ATTAAAAGCC TGTGTGAACG GCTGCGCGTG CCCAATGAGT ATCGGGATCT AGCGCTTTTG GTAAGCGATC AACATCAGAA TGTGCACCAA GCTTTTGAGT TAAGGAGCGA AACCATCATT AAACTGTTCG ATAAAGCCGA TTTTTGGCGT AAACCCGAAC GACTAAAGCA ACTTCTATTA GCCTGTATCG CCGATATGCG TGGTCGAACG GGATTCGAAC ATCAACCTTA CCCACAGAGC GACTACCTCA ATGCGTGTTT TTTAGCCGCC AATAATGTTG ATGTAAAGGC AATCATTGCT GCAGGTTTTC AAGGTGCCCA GATAAAAGAG GTAGTCAATT CGAAGCGAAT TGAAATGGTC GCTCAGGTAA AACAACATTG GCCAGGAGCA CAGGCTAAAG AGACGCCATA A
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Protein sequence | MKIYLVGGAV RDSLLNLPIK DKDFMVVGAT PEQMLQLGYR QVGKDFPVFL HPKTQQEYAL ARTERKVGLG YGGFSCYASP EVTLEQDLLR RDLTINAIAQ DEAGNLHDPF HGIADIEARQ LRHVSAAFSE DPLRVLRVAR FAARFHGLGF EIAPETMALM QHMSQTEELT ALTPERVWQE VDKSLGGPHP EVFFEVLRQC GALKVLFPEI DALFGVPQPE KWHPEIDTGL HTMMVLAQSS SMTEEKAVRF AALVHDLGKA LSPKEHWPKH HGHGQKGLPV IKSLCERLRV PNEYRDLALL VSDQHQNVHQ AFELRSETII KLFDKADFWR KPERLKQLLL ACIADMRGRT GFEHQPYPQS DYLNACFLAA NNVDVKAIIA AGFQGAQIKE VVNSKRIEMV AQVKQHWPGA QAKETP
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