| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2893 |
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| Symbol | |
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| ID | 4253464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3453219 |
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| End bp | 3454511 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119528 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_735021 |
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| Protein GI | 113971228 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000688047 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCGTT CCGAAGCGCT ATTTGAACAG GCTAAAAAAA CCATCCCCGG CGGTGTTAAC
TCTCCGGTTC GTGCATTTAA CGGTGTAGGT GGTTCGCCGC TGTTTATTGA AAAAGCCGAT
GGCGCTTATA TTTACGATGC CGATGGTAAA GCTTATATCG ACTATGTTGG CTCTTGGGGC
CCGATGATCC TCGGCCACAA CCATCCAAAG ATCCGTGAAG CCGTATTAGC TGCGGTGCAC
AATGGTCTGT CTTTTGGCGC GCCAACCGAA CTTGAAGTGC AAATGGCCGA GAAAGTCATC
GCCATGGTGC CTTCAATTGA GCAAGTGCGT ATGGTGAGCT CAGGCACTGA AGCCACCATG
AGTGCAATCC GTTTAGCGCG CGGTTTTACC AATCGTGACA AGATCTTAAA GTTTGAAGGC
TGCTACCATG GCCACGCAGA CTGCCTATTA GTTAAGGCAG GTTCTGGTGC TCTAACTTTA
GGTCAACCAA GCTCTCCTGG TATTCCTGAA GATTTCGCTA AGCACACCTT AACGGCTGTG
TATAACGATC TCGATTCTGT TCGTACGCTG TTCGAGCAAT ATCCAATTGA GATTGCATGT
ATCATCATCG AGCCTGTGGC AGGCAACATG AACTGTATCC CACCTATCCC AGGCTTCCTC
GAAGGTCTGC GCACTATGTG TGATGAGTTC GGTGCGCTGC TCATTATCGA CGAAGTGATG
ACGGGTTTCC GTGTATCACG AAGCGGTGCG CAAGGCCACT ATGGCGTTAC ACCAGACTTA
ACCACACTAG GTAAAGTCAT CGGTGGCGGC ATGCCTGTGG GTGCATTTGG CGGCCGTAAA
GACGTGATGC AGTTTATCGC TCCAACAGGT CCTGTGTACC AAGCGGGTAC CCTGTCAGGT
AACCCAATTG CGATGTCAGC AGGTCTAGCG CAAATGGAAG CCCTGTGTGA AGAAGGTCTA
TACGAAGCGC TGAGCGCGAA AACCAAACGT ATCGCCGAAG GCTTTAAAGC GGCGGCCGAC
AAACACGGCA TCCCAATGGC CATCAACTAT GTCGGTGGCA TGTTCGGCTT CTTCTTTACC
GAGCAAGAGC AGATCACGCG CTTCGACCAA GTGACTAAGT GCAATATTGA ACACTTCCGT
ACTTTCTATC ACGGCATGTT AGATGAAGGC GTTTACTTAG CGCCGAGTGC CTATGAAGCT
GGCTTCCTGT CGATGGCCCA TGGCGAAGAA GAACTGCGCC TCACGCTAGA AGCGGCGGAT
CGCGTATTAG CTCGTATGAA AGCGGCTATG TAA
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| Protein sequence | MTRSEALFEQ AKKTIPGGVN SPVRAFNGVG GSPLFIEKAD GAYIYDADGK AYIDYVGSWG
PMILGHNHPK IREAVLAAVH NGLSFGAPTE LEVQMAEKVI AMVPSIEQVR MVSSGTEATM
SAIRLARGFT NRDKILKFEG CYHGHADCLL VKAGSGALTL GQPSSPGIPE DFAKHTLTAV
YNDLDSVRTL FEQYPIEIAC IIIEPVAGNM NCIPPIPGFL EGLRTMCDEF GALLIIDEVM
TGFRVSRSGA QGHYGVTPDL TTLGKVIGGG MPVGAFGGRK DVMQFIAPTG PVYQAGTLSG
NPIAMSAGLA QMEALCEEGL YEALSAKTKR IAEGFKAAAD KHGIPMAINY VGGMFGFFFT
EQEQITRFDQ VTKCNIEHFR TFYHGMLDEG VYLAPSAYEA GFLSMAHGEE ELRLTLEAAD
RVLARMKAAM
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