| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2892 |
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| Symbol | |
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| ID | 4253463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3452173 |
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| End bp | 3453192 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119527 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_735020 |
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| Protein GI | 113971227 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000646707 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCAGT TCGAAGGATC TCATATCCTC TCCGTAAACC AGTTAGATCT TGATTCAATC
CAAACTATTT TTAATGTTGC CAATCGTATG ATGCCCTATG CACTTCGTGA GAAGCGCACT
AAGGTGCTCG AAGGCGCCAT TTTAGGTAAC CTGTTTTTCG AGCCAAGTAC CCGTACCCGC
GTGAGTTTTG GCTGTGCCTT TAACTTACTC GGCGGCCATG TGCGTGAAAC CACAGGCATG
GCTTCATCGT CCTTGTCTAA GGGCGAGTCC CTGTACGATA CCGCACGTGT ACTCTCGACC
TATTCCGATG TGATTGCGAT GCGCCACCCA GACTCTTATT CAGTGAAAGA GTTTGCTGAA
GGTAGCCGCG TGCCGGTGAT CAACGGTGGT GATGGTTCGA ACGAGCACCC GACTCAAGCG
CTGCTCGATC TGTTCACCAT TCAAAAAGAA TTAAGCCATG CTGGCCGTGG TATCGATGGC
ATGCATATCG CTATGGTGGG CGACTTAAAA TTTGGCCGAA CCGTTCATTC CCTGTCGCGC
CTGCTGTGCA TGTACAAGAA CATCAGCTTC ACGCTGATTT CGCCTGCTGA GTTAGCAATG
CCTGACTATG TGATCTCCGA CATTGAAAAT GCTGGCCATA GCATCAAAAT AACAGACCAG
CTTGAAGGCC ACTTAGATAA AGCCGACATT CTTTATCTAA CCCGCATTCA AGAAGAGCGC
TTCCCATCCC AGGAAGAAGC GAACAAATAC CGCGGTAAGT TCCGTTTGAA TCGCAGTATT
TATACCCAAC ATTGCAAATC TAACACTGTG ATCATGCACC CGCTGCCACG GGATTCGCGT
GCGCAAGCTA ATGAGTTAGA TAATGATTTG AACAGCCATC CTAATCTCGC TATCTTCAGA
CAGGCGGACA ATGGACTGCT AATTCGTATG GCACTGTTTG CATTGACACT CGGGGTTGAC
TCGCAACTCG AAAAATATGA GTGTCCCGTT AATTGGTATT CACGTAAAGC CGATCGCTAA
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| Protein sequence | MNQFEGSHIL SVNQLDLDSI QTIFNVANRM MPYALREKRT KVLEGAILGN LFFEPSTRTR
VSFGCAFNLL GGHVRETTGM ASSSLSKGES LYDTARVLST YSDVIAMRHP DSYSVKEFAE
GSRVPVINGG DGSNEHPTQA LLDLFTIQKE LSHAGRGIDG MHIAMVGDLK FGRTVHSLSR
LLCMYKNISF TLISPAELAM PDYVISDIEN AGHSIKITDQ LEGHLDKADI LYLTRIQEER
FPSQEEANKY RGKFRLNRSI YTQHCKSNTV IMHPLPRDSR AQANELDNDL NSHPNLAIFR
QADNGLLIRM ALFALTLGVD SQLEKYECPV NWYSRKADR
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