| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2891 |
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| Symbol | |
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| ID | 4253462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3450258 |
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| End bp | 3451982 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119526 |
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| Product | Cl- channel, voltage-gated family protein |
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| Protein accession | YP_735019 |
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| Protein GI | 113971226 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0598145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000020473 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAATTAA CGATAAATAA AGCCGCGATT CAAGACGCCA TCAGCACAGC TAAAAAGTAC
TTAACTAACG AGCTGCGTGA TCATTTATCC CAAGCCAAGA TCAGTGCGCA GTTGTGCTTA
CTGGCCTTGC TATTCGCCAT CTTCGCCTCC TGCGTGATCC TGTTGTTTCG ACTCTTACTC
CTGTGGGCGA ACCATTACAC CCAAATCGAG ACGCTGGATT TTACGGGTAA CATCGCCGAC
TGGCGAGCAC TGTTGCCACT TTTTGGCGCC TTGTTGATCT GGATTGTGGC CAAACTCGGC
TCCAAACGTT ACAAACGCAT GGGAATTGCC TATGTATTAC ATAGGGTTAA ATTGCACTAT
GGCAAAATCC CGTTGCAATC TGCCGCGGGG CAATTTTTTC AAGCGCTGTT TGCCTTAGGG
ACTAACTTCT CGGTAGGACG CGAAGGCCCC GCCATTCACC TTGGCGCCGT AAGTGCCAGC
GTGTTGGCCG AAAAATTTAA TCTTCCCGAC AATAGCGTGC GAATTATGTG CGCCAGTGGG
ATTGCCGCAG GGATAGCAGC AACCTTTAAC GCCCCGCTAG CGGCAGTAAT ATTTGTACTC
GAAGTGATAG TGCGCGAGTA CAAGGTGCAT TACTTCTTCC CGATTATGCT GTCCGCGATT
TGTGGTGCGG TTTCCAGCCA GCTGGTTTTT GGTAATGTGC ACGAGTTTGA TCGTATTCAA
GTAATCCATA TTCCATTGGA TCACTATCCC ATTTTAGCCT TGGGCGGCAT TGCACTGGGC
TGCGCGGCCG CCTTCTTCAA CTACGCGCTC CTTAAAGTCA CTGCCACTGG GCAAAACTGG
CCACTGATTT ATCGGCTCTT GCTGGCGGGC AGTATCACTA CGCTGATTGG CTTAATCTTG
CCCCAAGCCC TCGGCACTGG GGATTTAGCC ATCAGCGAAG CCATTAGCGA GCACCCTAGT
TTATTGCTAC TCATCGCCCT GCTTGCGGCA AAGATTATCG CCACGATTGC GGCAATCGGA
CTTGGGATCC CAGGCGGTTT GATTGGTCCA CTCTATGGTA TCGGCGCCTT AATAGGTGCC
ATCTTAGCCT TAGTTAGCGC CATTCTATTC CCTTCGATTG CGCCTTACGT TGGTCTCTAT
ACGGTTATTG GCATGACGGC CATGATGGGC GTTTGCCTCA GTGCGCCGCT CGCCGCCTTA
GTGGCACTGC TTGAGATGAC TAACGATGCC AGTATTATTC TGCCGGCGAT GTTTGTAACT
ATTCCCGCCT TCTTGATTGC CTATCAAGGG TTTAAAACCA ACTCCATCTT CTTCAAGCAG
TTAGAAATTA TGGGTCTAGG CTATAAAGTC GCCCCAGTGA ATTTGGCGCT ACAGAAAAAA
GGCGTGCGCG CCCTGATGGA TAAACGCTTC GTTATAGTCA ACAACAACGA CGAGCTGCTG
CTCGAAGTGT TAAAACGCGC CGAAGGTCGT CCAGTGTTAG TGCGTAACGC CGATGGGGTG
ATCGAAATGC TCAGCCTCGA GATGCAATCC TACGATGACA ACATCACCCT CTCGCGCCAT
CCAATGCAGG GGCTGAGTGA CACTAAAACC CTCGATGAGG TGTATAACTT GTTGTCGCCC
AGACGCAGCG GTGAGGTGTT TATCTATCAA GATACGCCTG ACAATGTAGT GGGCGTAGTG
AGTTGGTCGA ACCTACAGCA GGAAATTCGC TCGGGCCAAG TCTAA
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| Protein sequence | MQLTINKAAI QDAISTAKKY LTNELRDHLS QAKISAQLCL LALLFAIFAS CVILLFRLLL
LWANHYTQIE TLDFTGNIAD WRALLPLFGA LLIWIVAKLG SKRYKRMGIA YVLHRVKLHY
GKIPLQSAAG QFFQALFALG TNFSVGREGP AIHLGAVSAS VLAEKFNLPD NSVRIMCASG
IAAGIAATFN APLAAVIFVL EVIVREYKVH YFFPIMLSAI CGAVSSQLVF GNVHEFDRIQ
VIHIPLDHYP ILALGGIALG CAAAFFNYAL LKVTATGQNW PLIYRLLLAG SITTLIGLIL
PQALGTGDLA ISEAISEHPS LLLLIALLAA KIIATIAAIG LGIPGGLIGP LYGIGALIGA
ILALVSAILF PSIAPYVGLY TVIGMTAMMG VCLSAPLAAL VALLEMTNDA SIILPAMFVT
IPAFLIAYQG FKTNSIFFKQ LEIMGLGYKV APVNLALQKK GVRALMDKRF VIVNNNDELL
LEVLKRAEGR PVLVRNADGV IEMLSLEMQS YDDNITLSRH PMQGLSDTKT LDEVYNLLSP
RRSGEVFIYQ DTPDNVVGVV SWSNLQQEIR SGQV
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