Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2888 |
Symbol | |
ID | 4253459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3448450 |
End bp | 3448905 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638119523 |
Product | hypothetical protein |
Protein accession | YP_735016 |
Protein GI | 113971223 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.58238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000034338 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCGCTGA GCGAGCAAGA ATCCTCTTTG GCAACTCAGG CTACGCCGTC CTTGGCGAAA GCCCGTTTAC CTAAACGCTT AATTGCCTTG CTGCTACTCT ATGTTGCGGC ATCGGTTAGC GGCTTAATTG CCAAACAAGG GGTGCTTTTC TGCCTGTTAA CCCTATTGAT GGTGCTTGGG ATTATCGGTC GCCAAAAGGC TGGACTGATT ATGTTAAGGG GTTACACCTT AGTGCAATTG GCGCTAGTCA GCATGTTGCC TGTGATCCTT TATGATCCCG ACAACCTAGT GGCCGGGCCA ACCACAGTGC ATCTTGGCGA GTGGCAAGAA AAGCTGCCCG ATTACGTGAT TTTTATCGTG TTGATTGTCT TATCTTTATT GCAGGTGTGG GTGGCATTCG ATAAGAAAGT GAAGGCTTGG TTTAAACCTA AGCTTAATCT GAATATTATG AATTAA
|
Protein sequence | MSLSEQESSL ATQATPSLAK ARLPKRLIAL LLLYVAASVS GLIAKQGVLF CLLTLLMVLG IIGRQKAGLI MLRGYTLVQL ALVSMLPVIL YDPDNLVAGP TTVHLGEWQE KLPDYVIFIV LIVLSLLQVW VAFDKKVKAW FKPKLNLNIM N
|
| |