| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2886 |
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| Symbol | |
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| ID | 4253457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3447200 |
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| End bp | 3447895 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119521 |
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| Product | aquaporin Z |
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| Protein accession | YP_735014 |
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| Protein GI | 113971221 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000424459 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATGT CACAAAAAAT GGCGGCAGAA TTTTTGGGCA CTCTGTGGCT GGTTCTCGGC
GGCTGCGGCA GCGCAGTGCT TGCAGCAGCT TTTCCTGAGG TGGGGATAGG CTTACTCGGA
GTGTCACTTG CCTTTGGTTT AACGGTTCTG ACAATGGCCT TTGCGATTGG TCATATCTCA
GGTTGTCATC TGAATCCAGC GGTATCCTTT GGACTTTGGG CTGGCGGACG TTTTCCCGCA
TCGGAACTCC TGCCTTATAT CATTGCCCAA GTGGCGGGCG GTATTGTCGG TGCTGGCGCA
TTGTACGCAA TCGCCTCAGG GCAAGAAGGT TTTAGTCTAG CGGCGGGCTT TGCTTCTAAC
GGCTTTGGCG AACATTCGCC CGGCGGTTAC AGCATGATGT CGGTGCTGAT CTGCGAAATC
GTGATGACCT TGTTCTTTTT ATTAGTGATT TTAGGGGCGA CCGACGAGCG TGCGCCTAAA
GGCTTTGCAC CGATTGCGAT TGGTCTGTGT TTAACCCTTA TTCACTTAAT CAGCATTCCC
GTGTCAAATA CCTCGGTCAA TCCGGCCCGC AGTACCGGCC CTGCGCTTTT TGTTGGCGAT
TGGGCAGTAT CGCAACTGTG GATTTTCTGG GTTGCCCCCA TAGTTGGTGC GATTATCGCG
GGCGTGATTT ACCGTTATTT CAACGCCGCT AAGTAA
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| Protein sequence | MNMSQKMAAE FLGTLWLVLG GCGSAVLAAA FPEVGIGLLG VSLAFGLTVL TMAFAIGHIS
GCHLNPAVSF GLWAGGRFPA SELLPYIIAQ VAGGIVGAGA LYAIASGQEG FSLAAGFASN
GFGEHSPGGY SMMSVLICEI VMTLFFLLVI LGATDERAPK GFAPIAIGLC LTLIHLISIP
VSNTSVNPAR STGPALFVGD WAVSQLWIFW VAPIVGAIIA GVIYRYFNAA K
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