Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2881 |
Symbol | |
ID | 4253452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3435566 |
End bp | 3436966 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119516 |
Product | peptidase M23B |
Protein accession | YP_735009 |
Protein GI | 113971216 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000532238 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000791404 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGAAAGG TTATAACGTT ATTTAAATTG CTGCCTAAAA AGCATCAAAT TCTCCTCAGC ATTCTTTCTG TTATCACTAC GATAACCCTG CTCTTTCCCT CTGAAGAAGC GCAAGCTTCA AGACAAACTC AAGGTGTCGC AGACCAAGCT CAAGTCAATA CCCGTTACGA TGTTCCCTTA GCCTTTCGCT CACCAGAGCG TCCAGAAGGT GTTGAGGGCC AATCGCAAGA TGCATCCACC AACGCCACGC CGTTATCTTC GGCCGACGCC TTAGCCGCTG GCAATGTGTC AGCCAGTGAA ACCTTAGAGA GCGCCCACCA TAGGGACGTA GAACATTTTA ATGTGAAAAA TGGCGATACC TTAGCCGCAG TATTTGAGCG CGCGGGACTC ACCAGCAAAG ATGTGTATGA AATTACCCAG TTGCCACTCG CCAAACAGAA TCTGTTAAAA ATCATCCCAG GCGAAGAAAT CGTGATTTCA AAGAATGCTA AGGGCGATTT AACCGAAGTC CGCTACCGTG TCGATGCGGT ATCGACTTTA GTGATCACTA AGGATCAGGA TAAGTATTCC GAGAAAATCT CCGAAAAGGA CATTGAAATA CGCACCCAAT TCACCAGTGC GAAAATCAAG AGTAACTTCT GGAATGCCGC CGTCGATGCG GGTTTAAACG CAAACCAAAT TATGCAGCTC TCGACCGTGT TTGGCTGGGA TATCGACTTT GCCTTGGATT TACGCGAAGG CGATAGCTTC GCCATTATCT ATGAGCAGGA ATATGCCGAA GGTGAGTTTT TACGTAACGG CAATATCCTC GCCGCCGAGT TTATCAACCA AGATGAACGT TACACCGCGA TTCGTTATAC CGACGGCAAC TATTACTCCG AAAACGGCAC CAGCATGCGT AAGGCCTTCC TGCGCTCACC GGTCGACTTT AAATACGTCA GCTCCAACTT CAACCCGAAA CGTCTACACC CTGTGACGGG GCAAGTTAAG GCTCACCGCG GCGTTGACTA TGTTGCCGCC ATTGGCACCC CCATTAAGTC GGCGGGTAAT GGCCGAGTTA TCGAATCCGG CTACAATCAA TTTAACGGTA ACTATGTGTT CATTAAGCAC AACGATACCT ACACGACTAA GTATTTGCAT TTGACCAAAC GCAACGTCAG TAAAGGGGCC AGCGTTAAGC AGGGGCAAAT TATCGGCACC TTAGGTAAAA CAGGACGCGT CACCGGCGCT CACCTACACT ATGAATTTAT CGTTAATGGC GTGCACCGTA ACCCAAGAAC GGTTGATTTA CCTAAGGCCG AATCGATTGC CCGTAAAGAA AAGCCACAAT TCGATGCGCT CAGCAAACAG TTGATGGCCA GCATTTCACA GAACAAGCAA ACCCAATTGG CGATGCAATA A
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Protein sequence | MGKVITLFKL LPKKHQILLS ILSVITTITL LFPSEEAQAS RQTQGVADQA QVNTRYDVPL AFRSPERPEG VEGQSQDAST NATPLSSADA LAAGNVSASE TLESAHHRDV EHFNVKNGDT LAAVFERAGL TSKDVYEITQ LPLAKQNLLK IIPGEEIVIS KNAKGDLTEV RYRVDAVSTL VITKDQDKYS EKISEKDIEI RTQFTSAKIK SNFWNAAVDA GLNANQIMQL STVFGWDIDF ALDLREGDSF AIIYEQEYAE GEFLRNGNIL AAEFINQDER YTAIRYTDGN YYSENGTSMR KAFLRSPVDF KYVSSNFNPK RLHPVTGQVK AHRGVDYVAA IGTPIKSAGN GRVIESGYNQ FNGNYVFIKH NDTYTTKYLH LTKRNVSKGA SVKQGQIIGT LGKTGRVTGA HLHYEFIVNG VHRNPRTVDL PKAESIARKE KPQFDALSKQ LMASISQNKQ TQLAMQ
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