| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2874 |
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| Symbol | |
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| ID | 4253445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3430253 |
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| End bp | 3430963 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119509 |
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| Product | methylthioadenosine nucleosidase |
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| Protein accession | YP_735002 |
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| Protein GI | 113971209 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.326175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00179592 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATTG GTATTATTGG CGCAATGGAG CCAGAAGTTG CCCATCTTAT TGCGGCTATG
ACAAACGCCT CATCACAAAC GATCGCGGGT ATTGAATTTA TCGCAGGCAC CTTAGCGGGC
AAAGACGTAG TAGTGACACG CTCTGGTATT GGTAAAGTCG CTGCCAGTAT CGCAACCACA
CTGCTGATTG AGAAATACGC CCCCGATGCG GTAATCAACA CAGGTTCTGC GGGCGGTTTT
GTCGATTCAC TGTCGATTGG CGATATCGTG ATTTCATCCG AAGTGCGCCA CCACGATGTG
GATGTCACCG CATTTGGTTA CGAAATTGGC CAAATGGCGC AGCAACCCGC GGCGTTTATT
CCGGCGCCAT ACTTAGTCGA AGCGGCCAAT AAGGCCATCA AACAATTAGG TGAAGTGAAA
GCCATTGAAG GCTTAATCTG CACTGGCGAT AGCTTTATTT GCGATCCAGT ACGTACCAAG
ACCATGCTGG AACACTTCCC GACTATGGCA GCCTGTGAGA TGGAAGGCGC GGCGATTGCT
CAAGTGTGTC ATCAGTTTGG CGTGCCATTT GTGGTGATCC GCTCACTCTC AGACAACGCT
AACAATGACT CTCCAGTCGA CTTCGATTCT TACATTGTAA AGGCTGGCTA CCATTCGGCA
CTGATGGTGA TGTTACTGCT TGAGCAATTA GATCCAAATT CAGTAAAGTA A
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| Protein sequence | MKIGIIGAME PEVAHLIAAM TNASSQTIAG IEFIAGTLAG KDVVVTRSGI GKVAASIATT
LLIEKYAPDA VINTGSAGGF VDSLSIGDIV ISSEVRHHDV DVTAFGYEIG QMAQQPAAFI
PAPYLVEAAN KAIKQLGEVK AIEGLICTGD SFICDPVRTK TMLEHFPTMA ACEMEGAAIA
QVCHQFGVPF VVIRSLSDNA NNDSPVDFDS YIVKAGYHSA LMVMLLLEQL DPNSVK
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