| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2873 |
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| Symbol | gltD |
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| ID | 4253444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3428599 |
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| End bp | 3430005 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638119508 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_735001 |
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| Protein GI | 113971208 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0110656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACG ATTTTCAATT TATTGAAGTG GGTCGTAAAG ACCCAACTAA ACACCCTGCA
GCAAAGCGTT CGACTCAGTT TATTGAGATT TATCAGCCCT TTGCTCAAGC TCAGGTGACT
GAACAGGCGG ACCGTTGTCT GGATTGCGGT AACCCTTATT GTGAGTGGAA ATGCCCGCTG
CACAACTATA TTCCCAACTG GCTAAAGCTG GCACAGCAGG GCCGGATCAT GGAGGCGGCG
GACTTAGTCC ATGAAACCAA TACCCTGCCC GAGATCTGCG GCCGCGTCTG TCCACAGGAC
AGACTCTGTG AAGGGGCTTG TACCCTAAAC GCCGACTTTG GCGCCGTGAC TATCGGTAAT
GTCGAGAAAT ACATTACCGA TACCGCCATC GCCCAAGGCT GGCGTCCGGA TATGAGCAAG
GTCACGCCGC GCAAGGAAAA GGTCGCGATT GTGGGCGCTG GCCCTGCAGG TTTAGGCTGC
GCCGATATTC TTGCCCGTAA TGGGGTTAAG GCTGTGGTGT TTGATAAGTA TCCCCAGATT
GGTGGCCTGC TGACCTACGG TATTCCCTCC TTTAAACTGG ATAAAGCCGT GATGGCAACT
CGCCGCACTG TGTTAGAAGG CATGGGCATC GAGTTCAAGC TGGGCGTCAC TGTGGGTAAG
GACGTCGCCT TTAACCAGCT GCTTGAGGAA TACGATGCTG TCTTCCTCGG TATGGGGACC
TACACCGCCA TGAAAGCGGG CCTTGAGGGC GAAGACGCCC AAGGCGTGTA CCAAGCCCTG
CCCTACTTGA TTGGCAATAC CCATCACCTG ATGGGCAGCA GTAATCCAGA CACCCCTTAC
CTCAACCTTG CCGGTAAGCG CGTCGTGGTA CTCGGTGGTG GTGATACCGC CATGGACTGT
GTTCGCACCG CTGTTCGCCA AGGAGCCAGC AGTGTGATTT GTGCCTATCG CCGTGATGAA
GCCAACATGC CGGGTTCACG CCGCGAAGTG CAAAACGCCC GTGAAGAGGG AGTGAACTTC
CTGTTTAACC GTCAACCCGT GGCGATTAAA ACCCAGGACG GTAAAGTGGT GGGTGTGGAA
TGCGTTGAAA CCCAAATGGG TAAAGCCGAT GCGAGTGGCC GTCAACGTGC CGAAGCGATT
GAAGGCAGTG AGCAGTTACT CGATGCCGAT GCGGTGATTA TCGCCTTCGG TTTCCAACCT
AGCCCTGCGC CTTGGTTTGC CGATTACGGC ATTGAACTCG ACCAATGGGG CCGAGTGAAA
GCCAGTAAAC AGGCCGATAA CCCATTCCAA ACTACCAATC CGAAGGTATT TGCTGGCGGG
GATATGGTCC GTGGCTCGGA TCTGGTTGTG ACCGCAATTG CCGAAGGACG TGATGCCGCG
CAAGGCATTC TTAACTACTT AGATTAA
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| Protein sequence | MSNDFQFIEV GRKDPTKHPA AKRSTQFIEI YQPFAQAQVT EQADRCLDCG NPYCEWKCPL
HNYIPNWLKL AQQGRIMEAA DLVHETNTLP EICGRVCPQD RLCEGACTLN ADFGAVTIGN
VEKYITDTAI AQGWRPDMSK VTPRKEKVAI VGAGPAGLGC ADILARNGVK AVVFDKYPQI
GGLLTYGIPS FKLDKAVMAT RRTVLEGMGI EFKLGVTVGK DVAFNQLLEE YDAVFLGMGT
YTAMKAGLEG EDAQGVYQAL PYLIGNTHHL MGSSNPDTPY LNLAGKRVVV LGGGDTAMDC
VRTAVRQGAS SVICAYRRDE ANMPGSRREV QNAREEGVNF LFNRQPVAIK TQDGKVVGVE
CVETQMGKAD ASGRQRAEAI EGSEQLLDAD AVIIAFGFQP SPAPWFADYG IELDQWGRVK
ASKQADNPFQ TTNPKVFAGG DMVRGSDLVV TAIAEGRDAA QGILNYLD
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