| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2872 |
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| Symbol | gltB |
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| ID | 4253443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3424144 |
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| End bp | 3428592 |
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| Gene Length | 4449 bp |
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| Protein Length | 1482 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638119507 |
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| Product | glutamate synthase subunit alpha |
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| Protein accession | YP_735000 |
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| Protein GI | 113971207 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0333567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTAT ATCATCCCAG TTTTGAGCGG GACAATTGTG GTTTTGGCTT GATTGCACAA
ATGGATGGCG AAGCCAGCCA TCGTATCGTG CGCACCGCCA TCCATGGCCT CGATCGCATG
AAACACCGTG GCGGTATCGC CTCTGACGGT CGAACTGGGG ACGGCTGTGG TTTATTAATG
CAGCTACCAT TGCAATTCTT TGAAGCCATT GCCGCGGAAA ATGACTGGCA CCTGAGCCGT
AAATTCGCCG TTGGCATGTT GTTTTTAAGC CAAGATGAAG AACTGGCCGA CCAAGCCAAG
TTTATTCTCG AACGCGAACT CGAGCGTGAA ACCTTAAGCA TTGCCGGTTG GCGTAAAGTC
CCCGTCAATC CAGAGGTATT GGGTGAGATT GGTAAATCGA GCCTGCCGCA AATCTATCAA
GTCCTGATCA ACGCCCCAAT TGGCTGGCGT GAGAAAGATC TTGAGCGTCG CCTCTACATG
GCTCGCCGCC GTTTAGAGCA ACAAATTACT GACGATAAAG ACTTTTATGT CGCGAGTCTT
TCAGGCCAAG TCATAGTCTA CAAAGGCTTG ATGATGCCTG CCGACTTGCC CGCATTCTAT
CCTGACCTTG CCGACATCCG GTTGAAGAGC TCTATTTGTT TATTCCATCA ACGCTTTTCA
ACCAATACTT CACCTAAATG GCCACTCGCT CAGCCCTTTA GATATCTTGC CCATAACGGC
GAGATCAACA CTATTACCGG TAACCGCCAA TGGGCCCGTG CACGTGCCTA CAAATTTAAT
TCGCCGCTGC TGCCCGATTT ACAACAGGCG GCACCCTTTG TGAATGAAAC GGGCTCAGAT
TCATCCTCCC TCGACAATAT GCTCGAGATG CTGCTCTCAG GCGGTATGGA CCTATACCGC
GCCATGCGTT TGCTTATTCC GCCAGCGTGG CAAAGTAACC CAGAGATGGA TGACGAGCTA
AAAGCCTTTT ATGACTTTAA CTCCATGCAT ATGGAACCCT GGGACGGCCC AGCGGGTATC
GTCATGACCA ACGGTCGCCA CGCCGCTTGC GCAGTGGATC GTAACGGTCT TCGTCCATCA
CGTTATGTGA TCACCAAAGA TCGTATCCTC ACCCTCGCCT CCGAAGTGGG CATTTGGGAC
TACGCCGCCG ATGAAGTGAT TGAAAAAGGC CGCGTCGGCC CGGGTGAACT GTTAGTGTTA
GATACTCTCA ATGGTCGTCT GTACCAGTCA TTCGAAATCG ATAACGATCT TAAGCGTCGC
CACCCCTATA AAGAGTGGAT GGCGAAAAAC AGCCGTACTC TAATCCCAGC AGAGCAGTTG
GCAACGGAGC AACATGGCGC CAGCGAATTA AGCGCTGAGC AACTGCTGCA ATACCAAAAG
CAATTTGGTT ACACCCGCGA AGAGCTTGAA CAAGTAATTT GGGTGCTGGC AAAACAAGGC
GAAGAAGCGA CAGGTTCCAT GGGCGACGAT ACACCAATGG CCGTATTGTC GAAAAAGTCA
CGCTCGCTCT ATGACTATTT CCGACAGAAA TTCGCTCAAG TCACTAACCC GCCTATCGAT
CCGCTGCGTG AAAAGCACGT GATGTCTCTG GCGACCTGTA TCGGCCGCGA GCAAAACCTC
TTCAACGAAA CCACTGGCCA TGCTTATCGA GTGATGTTCA ACTCACCGAT ATTATTATTC
AGTGATTTCA ATCAATTACT CGGATTAGAT AGCACTTACT ATCGCGCCAA TATCGTCGAT
TTAAATTACG ATCCGAAGGA AGGCTTAGAA CACGCTATCC GCCGCATCAC CTCGGAAGCC
GAACGTTTAG CTCGCAGTGG CACCACGCTG CTGATTTTAT CCGACCGCGC GATTGATAAA
TCGGCGCAGG TGATCCCGGC GGCCATGGCG GTTGGCGCTG TACAACAAAT GCTGGTGAGC
AAGAGCCTGC GCTGCGATAC CAACATCATT GTTGAGACCG CATCGGCGCG GGATCCGCAC
CACTTTGCGG TGCTGCTCGG TTTTGGTGCC ACGGCGATTT ATCCGTATCT AGTGTATGAA
TCAATCTCAG ATCTGGCGAA ACGCCATCAA CTGACCGATA CCACGGCGCT GATGCTGAAC
TTCCGCTACG GCATAGAGAA AGGCCTGCGT AAGATCATGT CGAAGATGGG GATCAGCACC
GTCGGCTCCT ACCGTTGTAG CCAACAGTTT GAGGCCATTG GTATTGCCAG CGATGTAATT
GAACTCTGCT TTAAAGGGGT AGTGAGCCGC ATCGAAGGCG CCAGCTTTGA GGATATCGCT
CAAGATCAAG CGCTGCTGCA TAAGGCCGCT TACCGCGCCC ATGTGCCGCT GCCACAAGGC
GGTTTACTCA AATACGTTGA TGGCGGTGAG TACCACTGCT TCAACCCAGA TGTGGTCAAC
ACGCTGCAAG CATCCTTAAT CGACAAGAAT TTTGCGACCT ATAAGAAGTT CGCCGAATTA
GTCGATAACC GCCCAGTCGC CACCCTAAGG GATTTGATTG GCATTAAGGC TGACCAAGCC
GCGATTGAAC TGGATAAGGT CGAGGCTGCC AGCCACTTAT TCCCACGCTT TGACAGCGCG
GCCATGAGTA TCGGCGCCCT AAGCCCCGAG GCCCATGAGG CATTAGCCAT CGCCATGAAC
CGTTTAGGTG GCCGCTCTAA CTCGGGCGAA GGTGGTGAAG ATGCTCGCCG TTTTAATACC
GAACGTAACT CGGCGATTAA ACAAATTGCG TCGGCACGTT TTGGCGTAAC CGCCCATTAC
CTAGTCAATG CCGATGTGCT GCAGATTAAA GTTGCACAGG GCGCAAAACC CGGTGAAGGC
GGACAACTGC CAGGCCATAA GGTGAGTGTG GAAATTGCAG GGCTGCGCCA CGCGCGCCCA
GGTGTAACCT TGATTTCACC ACCACCACAC CATGATATTT ACTCTATCGA AGACTTAGCA
CAGCTGATTT TCGACTTAAA ACAAATCAAT ACCAAGGCAC TGATCTCCGT GAAGTTAGTG
TCTGAGCCTG GTGTCGGCAC TATCGCCACG GGTGTGGCAA AAGCCTACGC CGATATGATC
ACTATTTCTG GCTACGATGG CGGCACGGGC GCAAGCCCTA TCACCTCGGT GAAATACGCC
GGCAGCCCAT GGGAACTCGG CCTTGCCGAA GTGCATCAAT CTCTGGTGGA AAATGGTCTG
CGCCATAAGA TCCGCTTGCA GGTCGATGGC GGCCTAAAAA CCGGTACCGA TGTTATCAAG
GCGGCCTTAC TCGGCGCCGA GAGCTTCGGA TTCGGGACTG TGCCCATGAT TGCCTTAGGT
TGTAAGTACC TGCGTATTTG CCACCTGAAC AACTGCGCAA CCGGTGTCGC GACTCAGGAC
AAGAAACTGC GCGATAACCA CTACCACGGC TTACCAGAGC GAGTGATGAC TTACTTTGAG
TTTGTCGCCG AGGAAGTGCG CGAATGGATG GCAACGCTAG GGGTCAGCAA GTTCGAAGAC
TTAGTCGGCC GCAGTGAGTG GCTACATACC TTGGAAGGCC AGACCGATAA GCAACGTGGA
CTCGATTTAG CGCCGATCCT GTATCAGCCA AAGGTCAGAG CCAGCACCTC GCGCACTTGG
CAGGAAACCA ATCCACCAGC GGATTTAGGC TTACTCAACC AACATCTGCT CAACGAGTGC
CAGAATGCGG TCGATAAGGG CGAGTGTTTC GATGCCGCAT ACAGTATCAA CAATACTGAC
CGCTCAGTGG GCGCACGCCT ATCGGGCTAT ATCGCCAGCA CCCTTGGCGT TAAAGGCACT
AAGGCCCCGA TTAAACTCAG CTTTAATGGC AGTGCCGGCC AAAGCTTTGG GGTATGGAAC
AGCCCAGGTC TTGAACTCAA GCTCTGCGGT GATGCCAACG ACTACGTCGG TAAAGGCATG
TCGGGCGGCA AGATTGTGAT TTATCCACCG CTAGGGAGCC CGTTCCAGAG CGAGCGCAGC
GCGATTGTCG GTAACACTTG TCTGTATGGC GCGACTGGCG GACGCTTCTT CGCAGCGGGT
CAAGCGGGTG AACGCTTCGC GGTACGTAAC TCGGGCGCCA TCGCCGTAGT TGAAGGCTTA
GGCGATAACG GCTGCGAATA CATGACCAGC GGTATCGTTG TTGTGCTCGG CAAAACCGGG
GTTAACTTCG GCGCAGGGAT GACGGGCGGT TTTGCCTATG TCTTCGACCA ATTTGGCCGC
TTTAACCGCC GCGTGAATAA CGAGCTTGTC GATACCCAAA AACTCGAGTC TCCTATCCAT
CAACAGCATT TGAAAGGCTT GATTGAAGAG CATGTGGCCG AGACCGGCAG TGAGCACGCG
AAGATGATCT TAAGCGACTT TGCCAACTGG TTAGATTGCT TTGTTTTAGT GAAACCGAAA
AATATCGCCG TTGCAGATCT GCTCAAATTA GAGCAATCGA GCCCGGAACT AGCAGTTAAA
GCGGGGTAA
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| Protein sequence | MSLYHPSFER DNCGFGLIAQ MDGEASHRIV RTAIHGLDRM KHRGGIASDG RTGDGCGLLM
QLPLQFFEAI AAENDWHLSR KFAVGMLFLS QDEELADQAK FILERELERE TLSIAGWRKV
PVNPEVLGEI GKSSLPQIYQ VLINAPIGWR EKDLERRLYM ARRRLEQQIT DDKDFYVASL
SGQVIVYKGL MMPADLPAFY PDLADIRLKS SICLFHQRFS TNTSPKWPLA QPFRYLAHNG
EINTITGNRQ WARARAYKFN SPLLPDLQQA APFVNETGSD SSSLDNMLEM LLSGGMDLYR
AMRLLIPPAW QSNPEMDDEL KAFYDFNSMH MEPWDGPAGI VMTNGRHAAC AVDRNGLRPS
RYVITKDRIL TLASEVGIWD YAADEVIEKG RVGPGELLVL DTLNGRLYQS FEIDNDLKRR
HPYKEWMAKN SRTLIPAEQL ATEQHGASEL SAEQLLQYQK QFGYTREELE QVIWVLAKQG
EEATGSMGDD TPMAVLSKKS RSLYDYFRQK FAQVTNPPID PLREKHVMSL ATCIGREQNL
FNETTGHAYR VMFNSPILLF SDFNQLLGLD STYYRANIVD LNYDPKEGLE HAIRRITSEA
ERLARSGTTL LILSDRAIDK SAQVIPAAMA VGAVQQMLVS KSLRCDTNII VETASARDPH
HFAVLLGFGA TAIYPYLVYE SISDLAKRHQ LTDTTALMLN FRYGIEKGLR KIMSKMGIST
VGSYRCSQQF EAIGIASDVI ELCFKGVVSR IEGASFEDIA QDQALLHKAA YRAHVPLPQG
GLLKYVDGGE YHCFNPDVVN TLQASLIDKN FATYKKFAEL VDNRPVATLR DLIGIKADQA
AIELDKVEAA SHLFPRFDSA AMSIGALSPE AHEALAIAMN RLGGRSNSGE GGEDARRFNT
ERNSAIKQIA SARFGVTAHY LVNADVLQIK VAQGAKPGEG GQLPGHKVSV EIAGLRHARP
GVTLISPPPH HDIYSIEDLA QLIFDLKQIN TKALISVKLV SEPGVGTIAT GVAKAYADMI
TISGYDGGTG ASPITSVKYA GSPWELGLAE VHQSLVENGL RHKIRLQVDG GLKTGTDVIK
AALLGAESFG FGTVPMIALG CKYLRICHLN NCATGVATQD KKLRDNHYHG LPERVMTYFE
FVAEEVREWM ATLGVSKFED LVGRSEWLHT LEGQTDKQRG LDLAPILYQP KVRASTSRTW
QETNPPADLG LLNQHLLNEC QNAVDKGECF DAAYSINNTD RSVGARLSGY IASTLGVKGT
KAPIKLSFNG SAGQSFGVWN SPGLELKLCG DANDYVGKGM SGGKIVIYPP LGSPFQSERS
AIVGNTCLYG ATGGRFFAAG QAGERFAVRN SGAIAVVEGL GDNGCEYMTS GIVVVLGKTG
VNFGAGMTGG FAYVFDQFGR FNRRVNNELV DTQKLESPIH QQHLKGLIEE HVAETGSEHA
KMILSDFANW LDCFVLVKPK NIAVADLLKL EQSSPELAVK AG
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