| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2866 |
|---|
| Symbol | |
|---|
| ID | 4253437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 3419060 |
|---|
| End bp | 3419731 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638119501 |
|---|
| Product | DNA mismatch repair protein |
|---|
| Protein accession | YP_734994 |
|---|
| Protein GI | 113971201 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3066] DNA mismatch repair protein |
|---|
| TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000404837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.419127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGA TAATCCCCCC TCAAAATCTG AGCGAACTGC TCGAACGTGC CAATATGATG
GCCGGCATCT CTTTGGCCCA AATAGCAGCT CACCGCGGGA TTACTGTGCC TAAGGATCTG
AAGCGAGATA AGGGCTGGGT CGGACAACTC ATTGAAATGG AGTTAGGTGC AACAGCTGGC
TCAAAACCCG AGCAAGACTT TCTCCACCTC GGTGTTGAGC TAAAAACCAT TCCCATCGAT
AGCAAAGGCA AACCACTGGA AACCACCTAT GTGTGTGTGG CGCCGCTAAC CAATATCGAA
GGCTTAACTT GGCAAGACAG CTTAGTGTGT CACAAGTTAC AGCGTGTGCT CTGGGTACCC
GTTGAGGGCG AGCGGCATAT TCCTGTGGGA GATCGTCGAG TCGGCACCCC CATATTGTGG
GAGCCTGATC TCCAAGAGCA AAGGTTACTG CAACAGGATT GGGAGGAGAT AATGGAACTT
ATCGCCTTAG GTAAAGTGGA AAAACTCACC GCAAGGCATG GCGAAGTGTT GCAACTGCGC
CCTAAAGCCG CCAACAGTAA GGCGCTGACC CAGAGCATTG CCGAGGACGG TAGCCTGAAA
ATGACCAATC CACGGGGTTT CTATTTAAAG ACCGCTTTTA CCGCCATGCT ATTAAATAAG
GTATTTGGTT AA
|
|---|
| Protein sequence | MKPIIPPQNL SELLERANMM AGISLAQIAA HRGITVPKDL KRDKGWVGQL IEMELGATAG
SKPEQDFLHL GVELKTIPID SKGKPLETTY VCVAPLTNIE GLTWQDSLVC HKLQRVLWVP
VEGERHIPVG DRRVGTPILW EPDLQEQRLL QQDWEEIMEL IALGKVEKLT ARHGEVLQLR
PKAANSKALT QSIAEDGSLK MTNPRGFYLK TAFTAMLLNK VFG
|
|---|
| |