| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2864 |
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| Symbol | |
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| ID | 4253435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3415586 |
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| End bp | 3417820 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119499 |
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| Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
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| Protein accession | YP_734992 |
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| Protein GI | 113971199 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000439505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAAATA CGCTCAGGGA TATTACTCAA GCTGTGGCGT CCGCCCACAG CTTAGAAACC
GCATTAGAAG TCCTAGTTTC ATCGACCAAA GCGGCGATGG AAACCCAATG TTGCTCGGTC
TACATCCTAG ATCAGCAAGA ACTCGTATTA TCAGCCACCG ATGGCCTCGA AAAGAGTGCC
GTTGGGCGTG TACGCATGCC GTTAACCCAA GGTTTGGTTG GCTTGGCCGC TGAACGCGAA
GAAGCCGTAA ACCTCGCCGA TGCGCGTTTG CATCCACGCT TTAAACTCTT CCCCGAAGTC
GCTGAAGAAG AATACCGTGC CTTTTTAGCC GTCCCCATTA TTTATCAAAA AGCCGTAGTT
GGCGTGATTG TGGTGCAGCA GGCCAGCGCG CGGCAGTTTA GCGAAGGGGA AGAAGCCTTC
TTAATGACCT TGGCCGCGCA GCTCGCGATG GCGATTAGAG GATTAAAGCA AAAGGCACAA
GTCAGTTCGC TGCATCAACA GATTTTATTC CAGGGCACCT CAGCATCAAG CGGTATCGCT
ATTGCCCATG CCTTAGTGCT CGGTGGCGAA ATTTCCCTCG AGCAGCCCGA TGTACGCTGC
GAGGATATTG CCCTCGAATC CAGCCGATTA GTGGCGGCAA TGGGGCGTTG TAAAGAGGCA
ATCGGCGCCT TATCTCAACG TTTCGACCGT GAGCAGGATG AAGAAGTAGC CTCGATATTC
AATGCCTTGC AGCTGCTGCT CGATGATGCC AGCCTAGGTG GTGAATATGC CCGTGAAGTG
CAGCAGGGCT GGGAAGCCGA ATCGGCGGTC AGCCGAGTTT CGCTGCGTTA TATTCAACAG
TTTTTAGCGA TGGAAGATCC CTACCTGAAG GAGCGGGCGA GTGATATTCG TGACCTTGGG
CAAAAGGTAT TAAGGCAGTT AATCGAACCC GAGCGTTTAG AGCTTGAACC CGATAAGCCG
GTGATTCTCG TTACCCGTGA AGCGGATGCC ACATTGCTGG CGGAATTCCC TCGACAAAAA
TTAGCCGGTA TTGTCACTGA ACTGGGGGGC GTTAACTCCC ATGCGGCCAT TTTAGCGCGC
GCACTAGGCG TGCCCGCCAT TACCGGCGTT GAGCAATTGT TGTCGGCCGA TATTGACCAG
AAGTTATTAG TGGTCAATGC CAGCCGTGGG CAATTGATGG TGTCGCCATC GCCCGCCATT
GTGAGCGAAT ATCGCAGTTT GATTTCGGCG CAAAAGGCGT TGCAACGCCA ATACGCGCAG
GAGTTAGCCC TGCCGTCAGT CATGCTCGAT GGTACGCGTA TTCGTTTATA TCTTAACGCT
GGCTTACTCA GTGGCGTCGC CTCTGAAATC GCCGAAGGCG CCGATGGTAT CGGGCTCTAT
CGCACCGAAA TTCCCTTTAT GCTACAGCAG CGTTTTCCGA GTGAGTCCGA GCAGGTAAAA
GTCTATCAAC AGGTGTTATC GGCGGCATCG GCTCGCCCTG TGGTGATGCG TACCTTAGAC
GTGGGGGGCG ATAAGCCGCT GCCTTATTTC CCGATCAAAG AAGATAACCC CTTCCTAGGC
TGGCGCGGTA TCCGCTTATC ATTGGATCAT CCCGAGCTGT TCCTCGTACA GCTAAGAGCT
ATGTTGCAAG CGGGCGGAGA GGGCAAGCAG CTCAGTATTT TACTGCCTAT GGTCAGTAAC
TTAGATGAAA TTGATCAATC CTTGGCCTAT TTAGAGCAGG CCTATGTTGA ACTCAAGAAC
GATGTGAACA GCCAGATTGA AATGCCGCGC ATTGGCATTA TGCTCGAAGT TCCTGCGCTA
TTATATCAGT TAGATGAAGT CGCAAAACGC GTCGATTTTG TGTCGGTCGG CAGTAACGAT
TTGACCCAAT ATTTACTCGC AGTAGATCGT AACAACCCAA GGGTGAGTTC CCTGTTTGAT
AGTTATCATC CAGGCATTCT TCGGGCGCTG CACCAGGCTC GGCTCGATTG TGACTACCAT
GAACTCGATA TTAGTATCTG TGGCGAGCTG GCGGGGGAAC CCATGGGGGC GATTCTGTTG
GTGGCGATGG GATATCAGCA TTTGAGTATG AACCAAGGCA GTTTAGCCCG GATAAATTAC
CTGCTGCGCC GTGTGTCTCG CGCCGATTTG ACGCAACTCT TGTCGCAGGC TTTGAGCCTA
TCAAATGGTT TCCAAGTGCG TGAGTTGGTT AAAGAATATT TAACACAGCA GGGATTGGCC
ACAATTCTTA ATTAA
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| Protein sequence | MLNTLRDITQ AVASAHSLET ALEVLVSSTK AAMETQCCSV YILDQQELVL SATDGLEKSA
VGRVRMPLTQ GLVGLAAERE EAVNLADARL HPRFKLFPEV AEEEYRAFLA VPIIYQKAVV
GVIVVQQASA RQFSEGEEAF LMTLAAQLAM AIRGLKQKAQ VSSLHQQILF QGTSASSGIA
IAHALVLGGE ISLEQPDVRC EDIALESSRL VAAMGRCKEA IGALSQRFDR EQDEEVASIF
NALQLLLDDA SLGGEYAREV QQGWEAESAV SRVSLRYIQQ FLAMEDPYLK ERASDIRDLG
QKVLRQLIEP ERLELEPDKP VILVTREADA TLLAEFPRQK LAGIVTELGG VNSHAAILAR
ALGVPAITGV EQLLSADIDQ KLLVVNASRG QLMVSPSPAI VSEYRSLISA QKALQRQYAQ
ELALPSVMLD GTRIRLYLNA GLLSGVASEI AEGADGIGLY RTEIPFMLQQ RFPSESEQVK
VYQQVLSAAS ARPVVMRTLD VGGDKPLPYF PIKEDNPFLG WRGIRLSLDH PELFLVQLRA
MLQAGGEGKQ LSILLPMVSN LDEIDQSLAY LEQAYVELKN DVNSQIEMPR IGIMLEVPAL
LYQLDEVAKR VDFVSVGSND LTQYLLAVDR NNPRVSSLFD SYHPGILRAL HQARLDCDYH
ELDISICGEL AGEPMGAILL VAMGYQHLSM NQGSLARINY LLRRVSRADL TQLLSQALSL
SNGFQVRELV KEYLTQQGLA TILN
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