| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2858 |
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| Symbol | nhaR |
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| ID | 4253429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3410401 |
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| End bp | 3411309 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638119493 |
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| Product | transcriptional activator NhaR |
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| Protein accession | YP_734986 |
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| Protein GI | 113971193 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATC TTAATTACAA CCATCTTTAT TATTTCTGGA TGATCAAGAA GAAGGGTTCA
GTGGCTAAGG CCGCAGAAGC TCTTTGTTTA GCGCCACAAA CCATCACAGG CCAAATTCGC
GCCCTAGAAG ACAGGTTAAA TGGTAGTTTA TTCAAACGTG TCGGACGAAA TTTAGAAGCG
ACTGAACTTG GGGAACTGGT GTTTCGCTAT GCCGATAAGA TGTTTTCCCT CAGTTATGAG
ATGCTCGATT TACTGAACTA TCAAAAAGAT GATGCGATTT TGTTTGAAGT TGGTATTGCC
GATGCCTTGT CTAAAGCCCT GGCGAGTCGA GTATTACTTT CTGTGGTACC TAATGACGGT
TCCATGCACC TTGCTTGTTA TGAGGCGACT CACGAAAGTT TAATGACCCG TTTACGCGAG
CATAAATTGG ATATGATCCT CTCAGACTGT GCGGGTGAGT CATTGAAATA TCCCGAAATT
TTATCGAAAA AGCTGGGTGA GTGTGGCGTG AGTTTTTTTT CTGCAGAAAC CTACAGCGCC
GATTTCCCTG CTTGTTTAGA GCAAGGACAA TTGCTGATCC CAGGTCGTAG AACATCGCTT
GGGCAACAAT TATACCGTTG GTTCGATGAG CAAAATCTTA AGGTCAGTAT CTTAGGCGAA
TTTGATGATG CGGCCATGAT GAAGGCCTTT GGCTACCTTA AACGTGGAAT CTTCGTTACG
CCGTCGATTT ATCCCCAAGA AGTGATTTCC CACGGCATGC ATTTACTCGG TGAAACTCTT
GATGTTAAAG AGGAATACCA TGTCATGTTC GCAGAGCGGA TGATCCAACA TCCGGCGGTG
AAGCGTCTAT TAGAGACGGA TTTCAGTGAT TTATTTGCCG GATTAGACAG CCAAGTCCAG
CAGTGCTAA
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| Protein sequence | MLHLNYNHLY YFWMIKKKGS VAKAAEALCL APQTITGQIR ALEDRLNGSL FKRVGRNLEA
TELGELVFRY ADKMFSLSYE MLDLLNYQKD DAILFEVGIA DALSKALASR VLLSVVPNDG
SMHLACYEAT HESLMTRLRE HKLDMILSDC AGESLKYPEI LSKKLGECGV SFFSAETYSA
DFPACLEQGQ LLIPGRRTSL GQQLYRWFDE QNLKVSILGE FDDAAMMKAF GYLKRGIFVT
PSIYPQEVIS HGMHLLGETL DVKEEYHVMF AERMIQHPAV KRLLETDFSD LFAGLDSQVQ
QC
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