| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2855 |
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| Symbol | |
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| ID | 4253426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3407919 |
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| End bp | 3409532 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119490 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_734983 |
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| Protein GI | 113971190 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.955955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAG TAGTTGAACA CCAATCTGAC ATATTAGTCA TAGGTAGCGG TGCCGCAGGT
CTGACACTAG CTTTGCATCT TGCTGAAAAA GCAAACGTAA TTCTGCTCTC AAAAGGCCCA
CTCTCCGAAG GGTCGACATA CTACGCCCAA GGCGGTATCG CCTCCGTGTT CGATGAAAGT
GATACCATCG AATCCCATGT GGCCGATACG TTAGTGGCCG GTGCCGGCTT GTGCGATAAA
GAAGTGGTAA CTTTTACCGC TGAAAACGCC AAGAGCGCCA TGCAATGGTT AATTGAATGT
GGCGTGGCAT TCGATAAAGA AGAAACCGCT GGCGATAATG CCAAAGACGC ACCTTATCAT
TTAACCCGCG AAGGCGGCCA CAGCCATAGA CGCATTCTGC ATGCCGCAGA TGCGACGGGC
AAAGAAGTGC AAACCACGCT GCAAGAACGC GCCCTCGCCC ACCCCAATAT TCAAGTTTTA
GAACGTTACA ACGCCATCGA CCTCATCACC ACCCGTAAAT TAAATCGCCC CGGCAATCGC
GTGCTAGGCG CTTATGTGTG GAACCGTAAT GCCGAGCAGG TCGAAACCAT TAAGGCAAAA
TTTGTCGCAT TAGCTACAGG TGGTAGCTCT AAAGTCTACC AATACACCTC AAACCCCGAT
GTGGCGAGTG GCGATGGCAT TGCCATGGCG TGGCGCGCAG GTTGCCGTGT GGCCAACATG
GAATTTAATC AATTCCATCC AACCTGCCTT TACCATGCCG ATGCCCGTAA CTTCCTGCTG
ACCGAAGCCC TGCGCGGTGA AGGTGCTTAT TTGCGCCGCC CCGATGGCAG TCGCTTTATG
CCAGACTTTG ACGAACGCGC CGAACTCGCA CCTCGCGATA TCGTAGCCCG AGCCATCGAC
TACGAAATGA AACGCTTAGG TGCCGATTGC GTCTATTTAG ATATCAGCCA TAAAGACAGC
GACTTTGTCA TCAAGCATTT CCCGACGATC TACAGTCGCT GCTTAGAGCT GGGGATCGAT
ATCACCAAAG ATGCCATTCC TGTGGTGCCT GCTGCCCACT ATACCTGTGG TGGTGTAATG
ACGGACTTGC ATGGCCAAAC CGACCTCAAC GGCCTCTACG CCATAGGTGA GGTAGCTTAT
ACCGGCTTAC ATGGTGCGAA CCGCTTGGCA AGCAACTCGC TGCTGGAGTG CTTGGTATTT
GCCCGCGCCG CGTCGCAGGA TATTGAGAGC CAAATGCACA AAATCCCATT ACCGGGGCAA
ATTCCAGCGT GGGACGAGAG TAAAGTCTCC AACTCCGATG AAGAAGTGGT GATTGCCCAC
AACTGGCACG AACTGCGCCT CTTTATGTGG GACTATGTGG GAATCGTACG CTCGGATAAA
CGCTTGGAGC GCGCACTGCG CCGCTGCTTG ATGTTGCAGC AGGAAATCCA AGAGTATTAC
AGCAACTTCA GAGTCAGTAA TAATCTGCTG GAACTGCGTA ACTTAGTGCA AGTAGCCGAG
CTTATTATCC GCTGCGCGAT GGAGCGCAAG GAAAGCCGTG GTTTGCACTA CAATATCGAC
CATCCCGAAA AGGTTGACTC TCCGCAACCG ACGATTCTGC AGCCTGAAAA ATAA
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| Protein sequence | MKQVVEHQSD ILVIGSGAAG LTLALHLAEK ANVILLSKGP LSEGSTYYAQ GGIASVFDES
DTIESHVADT LVAGAGLCDK EVVTFTAENA KSAMQWLIEC GVAFDKEETA GDNAKDAPYH
LTREGGHSHR RILHAADATG KEVQTTLQER ALAHPNIQVL ERYNAIDLIT TRKLNRPGNR
VLGAYVWNRN AEQVETIKAK FVALATGGSS KVYQYTSNPD VASGDGIAMA WRAGCRVANM
EFNQFHPTCL YHADARNFLL TEALRGEGAY LRRPDGSRFM PDFDERAELA PRDIVARAID
YEMKRLGADC VYLDISHKDS DFVIKHFPTI YSRCLELGID ITKDAIPVVP AAHYTCGGVM
TDLHGQTDLN GLYAIGEVAY TGLHGANRLA SNSLLECLVF ARAASQDIES QMHKIPLPGQ
IPAWDESKVS NSDEEVVIAH NWHELRLFMW DYVGIVRSDK RLERALRRCL MLQQEIQEYY
SNFRVSNNLL ELRNLVQVAE LIIRCAMERK ESRGLHYNID HPEKVDSPQP TILQPEK
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