Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2841 |
Symbol | |
ID | 4253412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3395693 |
End bp | 3396964 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638119476 |
Product | hypothetical protein |
Protein accession | YP_734969 |
Protein GI | 113971176 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.063755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGCTA TATCGACAAG CGCACTCCTC ATTTTCTTAC TAGTGCTTAT TCTTTGTTCT GCCTACTTTT CAGGTTCTGA AACCGCCATG ATGACCCTTA ACCGCTATCG GTTAAGACAT CTCGCCTCAA ACGGCCATAA AGGTGCCATT CGTGCCCTCA AGTTGCTCGA ACGTCCAGAC CGCTTAATTG GCTTAATTCT GATTGGCAAT AACCTGGTTA ATATTCTTGC CTCGGCCATT GCCACCATTG TTGGTATGCG CCTTTGGGGC GATTTAGGCG TCGCGATAGC CACAGGTGTG CTGACCTTGG TCGTATTGGT CTTTGCCGAA GTCACACCCA AAACCATCGC CGCCTTGAAC CCTGAGCGAA TTGCCTTCCC ATCGAGTATT TTACTCATTG GTTTATCAAC AATTTTTGCC TATGTCGTTA CCAGCGTTAA CTGGATAACC ACAGGTATGC TGCGTCTCTT TGGCATCAAA ACCATCAGCA GCAGTGATGC ACTCAGCCAA GAAGAATTAA GGACGGTAGT CCATGAGGCT GGCGCCTTGA TCCCCCAACG CCACCAAGAG ATGTTGTTAT CAATCTTGGA TTTAGAGAAG GTCACCGTAG AGGACATCAT GGTGCCGCGC TCGGATATTT ACGCCATTAA CGTCAACGAT GATTTTAAGT ATATCAACCG TCAAGTGATC CAAAGTCCAC ATACTCGTGT ACTGGTTTAC CGCGATACCA TTGACGATGC CGTCGGCTTT ATTCATCTGC GTGACGCGCT GCGCCTGCAA TCGAAAGAGC AGTTCAGTAA GTCCTCATTG CTACGTGCTG TCAAAGAACT CTACTTTATT CCCGAAGGTA CACCGCTCAA TGTGCAATTA GCCAACTTTC AGCACAATAA AGAACGTATC GGCCTAGTAG TCGATGAATA CGGTGATATC CAAGGATTAG TGACACTCGA AGATATTCTC GAAGAAATTG TCGGTGACTT CACCACCTCT ATGCTGGCCA CACCGAGTGA AGACATTACC GCCCAGCAGG ATGGAAGCTA CTTAGTCGAT GCCAGTATCA CTATCCGTGA TTTGAATAAA GAAATGAAAT GGGACTTCCC AACCGATGGC CCCAAAACCC TCAATGGCCT GATCTTAGAG TATTTAGAGG ATATCCCCGC AGAAAACACT AGCCTTCGCC TAGCCGGTTA TCCATTAGAA GTCATTGAAG TCGCAGACAA TATGGTCAAA ACCGTACGTA TCATTCCACA GCATTATCAG TCTCCACGCT AA
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Protein sequence | MDAISTSALL IFLLVLILCS AYFSGSETAM MTLNRYRLRH LASNGHKGAI RALKLLERPD RLIGLILIGN NLVNILASAI ATIVGMRLWG DLGVAIATGV LTLVVLVFAE VTPKTIAALN PERIAFPSSI LLIGLSTIFA YVVTSVNWIT TGMLRLFGIK TISSSDALSQ EELRTVVHEA GALIPQRHQE MLLSILDLEK VTVEDIMVPR SDIYAINVND DFKYINRQVI QSPHTRVLVY RDTIDDAVGF IHLRDALRLQ SKEQFSKSSL LRAVKELYFI PEGTPLNVQL ANFQHNKERI GLVVDEYGDI QGLVTLEDIL EEIVGDFTTS MLATPSEDIT AQQDGSYLVD ASITIRDLNK EMKWDFPTDG PKTLNGLILE YLEDIPAENT SLRLAGYPLE VIEVADNMVK TVRIIPQHYQ SPR
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