| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2834 |
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| Symbol | |
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| ID | 4253405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3389216 |
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| End bp | 3390307 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119469 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_734962 |
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| Protein GI | 113971169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000633865 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGG ATACGATCAA TAACGTACAC ATCAGTTCAG AGAAAGTTCT TATTACACCG
CAGGAGCTAA AAGCGGCCCT GCCACTCTCT GAGCATGCGT ATCGTTATAT CCTCAATGCA
CGCAAAACAG TGGCGGATAT TGTCCATAAG CGCGATAACC GCGTGCTTAT CGTCACTGGA
CCTTGTTCTA TCCATGATAT CGATGCCGCC AAGGAATACG CCTTAAAGCT TAAAAAACTA
CACGATGAAC TCAGCGATGA GTTTTACATC CTGATGCGAG TCTACTTTGA GAAGCCACGT
ACCACAGTGG GTTGGAAGGG GATGATTAAC GATCCTGATA TGGACGAGTC CTTCGATGTT
GAGAAGGGTT TAAAGATGGC CCGTGAGCTG ATGATTTGGT TGGCCGAACT CGAACTGCCT
GTGGCAACCG AAGCGCTCGA TCCGATCAGC CCACAGTACA TCTCGGAATT AGTCACTTGG
TCGGCCATTG GTGCTCGCAC GACTGAGTCG CAAACCCACA GGGAAATGGC GTCGGGTTTA
TCTATGCCCG TCGGCTTTAA AAATGGCACA GATGGAAAGC TCGATGTAGC GATTAACGCG
CTGAAATCGG CGGCCAGCAG CCACAGATTT ATGGGGATTA ACCAGCAGGG CCAAGTGGCG
TTATTGCAAA CCGCGGGAAA TCCCGATGGA CATGTGATCC TGCGTGGCGG CGCCACGCCA
AACTACGATG CAAAGAGCGT TGCCGAGTGT GAAGCGCAGT TACATAAAGC CAAACTCAAT
GCTCGCCTTA TTATCGATTG TAGCCACGGT AATTCGTCTA AGGACTACAC AAGGCAAGTC
CCTGTGTGTG AAGATGTATT TGCCCAGATT TACAACGGCA ATAAATCCAT CATTGGCGTG
ATGTTAGAAA GCCATTTAAA TGAAGGTAAT CAGAGTTGTG ATAAACCATT GAGCGAATTG
GCCTATGGGG TTTCTGTGAC AGACTCCTGT ATTAATTGGG AAAAAACCGA AAGCGTTTTA
CGTGCGGGCG CATCGAAGTT ATCTTCGGTA TTAGCAACCC GTTTCGATAT GCTCAAAGTG
GCCAATGCTT AA
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| Protein sequence | MQQDTINNVH ISSEKVLITP QELKAALPLS EHAYRYILNA RKTVADIVHK RDNRVLIVTG
PCSIHDIDAA KEYALKLKKL HDELSDEFYI LMRVYFEKPR TTVGWKGMIN DPDMDESFDV
EKGLKMAREL MIWLAELELP VATEALDPIS PQYISELVTW SAIGARTTES QTHREMASGL
SMPVGFKNGT DGKLDVAINA LKSAASSHRF MGINQQGQVA LLQTAGNPDG HVILRGGATP
NYDAKSVAEC EAQLHKAKLN ARLIIDCSHG NSSKDYTRQV PVCEDVFAQI YNGNKSIIGV
MLESHLNEGN QSCDKPLSEL AYGVSVTDSC INWEKTESVL RAGASKLSSV LATRFDMLKV
ANA
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