Gene Shewmr4_2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2832 
Symbol 
ID4253403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3386132 
End bp3387796 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content48% 
IMG OID638119467 
Producthydroxylamine reductase 
Protein accessionYP_734960 
Protein GI113971167 
COG category[C] Energy production and conversion 
COG ID[COG1151] 6Fe-6S prismane cluster-containing protein 
TIGRFAM ID[TIGR01703] hydroxylamine reductase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.310206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTGTA TTCAGTGTGA GCAAACTATT CGTACCCCCG CCGGCAACGG TTGTAGCTAT 
GCCCAAGGTA TGTGTGGCAA ATTGGCCGCG ACCTCGGATC TGCAAGACTT GTTAATCTAC
ATGCTGCAGG GTGTTTCAGT GTATGCGACT AAGGCTCGTG AACTGGGCGT CGTTGACCCT
GAGGTGGATA CCTTTGTTCC TAAAGCTTTT TTCTCGACCT TAACCAACGT TAACTTCGAT
GATGAACGCA TCATCGCCTA TGCCAAGCAG GCGGCTGAGT ACCGTGAAAG TTTAAAAAAT
GCCTATGAAG CGGCGTGTGA AGCTGCGGGT AAATCGGCTG AATCGCTCCC TCCTGTGGCG
CAATTTGTAC TGGGTACCAG TAAGCCCGAA ATGTTGTCTC AAGCGCCAGT CGCCTTACTC
AATAAAGATA AAAATGATAT CCACGAAGAT ATCCTTGGGC TGAGACTACT GTGCTTATAT
GGCCTTAAAG GTGCGGCGGC TTACATGGAG CACGCCCGTG TATTAGGTAA AACCGACGCT
GAGATTGCTG GTCGCTTCCA TGAGATTATG GCGTTTCTCG GTGAGCCGAG CGTCGATGCC
GATAAACTGT TCATAACAGC CATGGATATT GGTCAACTGA ACTACCGCAT CATGGCGATG
CTCGATGCGG GCGAGACCGA AGCCTTCGGT CATCCGGAAC CGACTGTCGT CAACACTAAA
GCGGTTAAAG GCAAAGCGAT TCTGGTTTCT GGCCATGATA TGAAGGATTT AGAGCTTATC
CTCGAGCAAA CGGCGGGTAA AGGCATTAAT GTTTATACCC ATGGCGAAAT GCTCCCCGCG
CTGGCGTATC CCGCCTTTAA AAAATATGCT CATTTAGTGG GTAACTACGG CAGTGCATGG
CAGAACCAGC AAAAAGAATT TGCTAATTTC CCTGGCGCCG TAGTGATGAC CTCAAACTGT
ATTATTGACC CGAATGTGGG CCAATACAGC GACCGTATCT TTACCCGCAG TATCGTGGGT
TGGCCTGGTG TAACCCATGT GGTTGGGGAC GATTTTTCAG TTGTGATCGA CAAGGCGCTC
GCTCTTGATG GCTTCCAATA CGATGAAATC CCACACAATA TCACTATCGG TTTTGCCCGT
AATGCCTTAA TGGCTGCGGC ACCGACTGTG GTTGAAAACG TGAAAAACGG TTCTATCAAA
CACTTCTTCT TAGTCGGTGG CTGTGATGGC GATAAGTCTG AGCGGAGTTA TTTCACTGAC
TTAGCGAAAT CGGCGCCAAA GGATTCCGTT ATCCTGACCT TAGGTTGTGG TAAGTACAAA
TTCAACAAGC TGGAATTTGG CGATATCAAC GGTATTCCGC GCTTACTCGA TATTGGCCAA
TGTAACGATG CCTATTCGGC TATTCAGTTG GCTATCGCGC TATCACAAAT TTTTGAATGC
GATATCAATG AATTACCATT GAACCTCGTG CTTTCATGGT TTGAGCAGAA AGCCATTGTC
GTGCTGCTGA CGCTATTGTC GCTTGGGGTG AAAAATATCC GTACCGGCCC GACGCCGCCA
GCGTTTTTAA CGGCTAATCT TGCCAAAATT TTGGAAGAAA AATTTGGCCT GCGTAACACC
ACCACAGTTG AAGCCGATCT TAAAACCATG CTGAACGTGG CATAG
 
Protein sequence
MFCIQCEQTI RTPAGNGCSY AQGMCGKLAA TSDLQDLLIY MLQGVSVYAT KARELGVVDP 
EVDTFVPKAF FSTLTNVNFD DERIIAYAKQ AAEYRESLKN AYEAACEAAG KSAESLPPVA
QFVLGTSKPE MLSQAPVALL NKDKNDIHED ILGLRLLCLY GLKGAAAYME HARVLGKTDA
EIAGRFHEIM AFLGEPSVDA DKLFITAMDI GQLNYRIMAM LDAGETEAFG HPEPTVVNTK
AVKGKAILVS GHDMKDLELI LEQTAGKGIN VYTHGEMLPA LAYPAFKKYA HLVGNYGSAW
QNQQKEFANF PGAVVMTSNC IIDPNVGQYS DRIFTRSIVG WPGVTHVVGD DFSVVIDKAL
ALDGFQYDEI PHNITIGFAR NALMAAAPTV VENVKNGSIK HFFLVGGCDG DKSERSYFTD
LAKSAPKDSV ILTLGCGKYK FNKLEFGDIN GIPRLLDIGQ CNDAYSAIQL AIALSQIFEC
DINELPLNLV LSWFEQKAIV VLLTLLSLGV KNIRTGPTPP AFLTANLAKI LEEKFGLRNT
TTVEADLKTM LNVA