Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2832 |
Symbol | |
ID | 4253403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3386132 |
End bp | 3387796 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119467 |
Product | hydroxylamine reductase |
Protein accession | YP_734960 |
Protein GI | 113971167 |
COG category | [C] Energy production and conversion |
COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
TIGRFAM ID | [TIGR01703] hydroxylamine reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.310206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTGTA TTCAGTGTGA GCAAACTATT CGTACCCCCG CCGGCAACGG TTGTAGCTAT GCCCAAGGTA TGTGTGGCAA ATTGGCCGCG ACCTCGGATC TGCAAGACTT GTTAATCTAC ATGCTGCAGG GTGTTTCAGT GTATGCGACT AAGGCTCGTG AACTGGGCGT CGTTGACCCT GAGGTGGATA CCTTTGTTCC TAAAGCTTTT TTCTCGACCT TAACCAACGT TAACTTCGAT GATGAACGCA TCATCGCCTA TGCCAAGCAG GCGGCTGAGT ACCGTGAAAG TTTAAAAAAT GCCTATGAAG CGGCGTGTGA AGCTGCGGGT AAATCGGCTG AATCGCTCCC TCCTGTGGCG CAATTTGTAC TGGGTACCAG TAAGCCCGAA ATGTTGTCTC AAGCGCCAGT CGCCTTACTC AATAAAGATA AAAATGATAT CCACGAAGAT ATCCTTGGGC TGAGACTACT GTGCTTATAT GGCCTTAAAG GTGCGGCGGC TTACATGGAG CACGCCCGTG TATTAGGTAA AACCGACGCT GAGATTGCTG GTCGCTTCCA TGAGATTATG GCGTTTCTCG GTGAGCCGAG CGTCGATGCC GATAAACTGT TCATAACAGC CATGGATATT GGTCAACTGA ACTACCGCAT CATGGCGATG CTCGATGCGG GCGAGACCGA AGCCTTCGGT CATCCGGAAC CGACTGTCGT CAACACTAAA GCGGTTAAAG GCAAAGCGAT TCTGGTTTCT GGCCATGATA TGAAGGATTT AGAGCTTATC CTCGAGCAAA CGGCGGGTAA AGGCATTAAT GTTTATACCC ATGGCGAAAT GCTCCCCGCG CTGGCGTATC CCGCCTTTAA AAAATATGCT CATTTAGTGG GTAACTACGG CAGTGCATGG CAGAACCAGC AAAAAGAATT TGCTAATTTC CCTGGCGCCG TAGTGATGAC CTCAAACTGT ATTATTGACC CGAATGTGGG CCAATACAGC GACCGTATCT TTACCCGCAG TATCGTGGGT TGGCCTGGTG TAACCCATGT GGTTGGGGAC GATTTTTCAG TTGTGATCGA CAAGGCGCTC GCTCTTGATG GCTTCCAATA CGATGAAATC CCACACAATA TCACTATCGG TTTTGCCCGT AATGCCTTAA TGGCTGCGGC ACCGACTGTG GTTGAAAACG TGAAAAACGG TTCTATCAAA CACTTCTTCT TAGTCGGTGG CTGTGATGGC GATAAGTCTG AGCGGAGTTA TTTCACTGAC TTAGCGAAAT CGGCGCCAAA GGATTCCGTT ATCCTGACCT TAGGTTGTGG TAAGTACAAA TTCAACAAGC TGGAATTTGG CGATATCAAC GGTATTCCGC GCTTACTCGA TATTGGCCAA TGTAACGATG CCTATTCGGC TATTCAGTTG GCTATCGCGC TATCACAAAT TTTTGAATGC GATATCAATG AATTACCATT GAACCTCGTG CTTTCATGGT TTGAGCAGAA AGCCATTGTC GTGCTGCTGA CGCTATTGTC GCTTGGGGTG AAAAATATCC GTACCGGCCC GACGCCGCCA GCGTTTTTAA CGGCTAATCT TGCCAAAATT TTGGAAGAAA AATTTGGCCT GCGTAACACC ACCACAGTTG AAGCCGATCT TAAAACCATG CTGAACGTGG CATAG
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Protein sequence | MFCIQCEQTI RTPAGNGCSY AQGMCGKLAA TSDLQDLLIY MLQGVSVYAT KARELGVVDP EVDTFVPKAF FSTLTNVNFD DERIIAYAKQ AAEYRESLKN AYEAACEAAG KSAESLPPVA QFVLGTSKPE MLSQAPVALL NKDKNDIHED ILGLRLLCLY GLKGAAAYME HARVLGKTDA EIAGRFHEIM AFLGEPSVDA DKLFITAMDI GQLNYRIMAM LDAGETEAFG HPEPTVVNTK AVKGKAILVS GHDMKDLELI LEQTAGKGIN VYTHGEMLPA LAYPAFKKYA HLVGNYGSAW QNQQKEFANF PGAVVMTSNC IIDPNVGQYS DRIFTRSIVG WPGVTHVVGD DFSVVIDKAL ALDGFQYDEI PHNITIGFAR NALMAAAPTV VENVKNGSIK HFFLVGGCDG DKSERSYFTD LAKSAPKDSV ILTLGCGKYK FNKLEFGDIN GIPRLLDIGQ CNDAYSAIQL AIALSQIFEC DINELPLNLV LSWFEQKAIV VLLTLLSLGV KNIRTGPTPP AFLTANLAKI LEEKFGLRNT TTVEADLKTM LNVA
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