Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2819 |
Symbol | |
ID | 4253390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3372600 |
End bp | 3374105 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638119454 |
Product | carboxypeptidase Taq |
Protein accession | YP_734947 |
Protein GI | 113971154 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2317] Zn-dependent carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCG CTATGAACAC CAAAGAACCT ACGCAAAGTT ACGATAAACT CACGGCCCAT TTCCAGAAAA TTTCACATTT TGAACATTTT AGTGCGCTTG GTGATTGGGA TCAGGCCGCC ATGATGCCCC TCGGTGGCGG CAGCGAGCGT GGCGATGCGA TGGCAGAACT GGCGTTACAT ATCCACAGCC TTAAAACGGC GCCAGAGCTT GGCGATAACC TCGCACAAGC CTCGCAAGAG GCGCTGAGCC CAGAGCAACA GGCCAATCTG AGGGAAATGC AATATCAGTA TCAACAGGCG ACCTTAGTGC CGGGTGAGCT AGTACAGGCC AAAACGAAAA TGGCCTACCA ATGTGAGAAT GCCTGGCGCG AGCAACGCAA AAACAATGAT TGGCAAGGTT TTAAACCGAA TCTAAAAGCG GTGATTGCCC TCGCGAGGGA AGAAGCCTTA ATTCGCGCGC AGGCCCTTAA CATCTCCCCC TATGATGCCC TGCTCGATAA ATTTGAGCCC GGCATGACCA CGGCAAAGCT TGAGCAGACC TTTGGTGACT TAAAAACGTG GTTACCCAGT TTTATCCAAG ATGTACTGGC AAAACAAGCC AGTGAACCCA AGCTTACCCT TAACGGCCCC TTCGAAATCA AGGCACAGCA AGCCCTAGGC CAAGCGGTGA TGGCCTATTT AGGGTTTGAT TTTAACCATG GCAGGCTCGA TATCAGCAGC CACCCATTTT GTGGTGGAGT GCCAAGCGAT GTACGCATCA CGACGCGTTA TAATGAAGCC GATTTTAGCA GTGCTATCAT GGGCATAGTG CATGAAACTG GCCACGCCCG TTATGAACAG GGCTTACCGA AACAATGGCG CGGTCAGCCC GCAGGATTGG CTCGCTCCAT GGGCGTCCAT GAGAGCCAAA GCTTATTTTG TGAAATGCAG CTCGGTGCCA ATCCCGCGTT TTTACGCCAA TTACAACCAC TGATTAAACA GCATTTGGGC TGTGAGTTTA GCGCCCAAGA CTTGGCAAGA CACTATACCC GCGTCAATCC CGGGCTTATC CGTGTCGATG CCGATGAAGT CACTTACCCT TGCCATATTC TATTGCGCTT TGAAGCCGAA AAAGCCTTTA TCGACGGTAG CCTGAGTGTG GATGATCTCC CTGATTTTTG GTCAAGCCAG ATGCAACAAC TGCTCGGGAT CAATACCGAT GGAAACTATC GCGATGGTTG TATGCAGGAT ATCCATTGGG CCGTAGGTGA ATTGGGGTAT TTTCCAAGTT ATACCTTAGG CGCCATGTAT GCCGCCCAAT GCCGTTTTGC GCTGGAGCGA AGCTTAGGCC CGATTGAAAA CCTCATCGAT AATGGGCAGT TATCCCAAGT ATTTGACTGG CTTGGCACTC ATATTTGGTC CAAAGGCTCA TTACTGACAA CGGATGAACT CATCATTCAA GCCACAGGAG AGCCGCTCAA TAGCCAATAT CTAGCCAAAC ATTTGAAGCA ACGTTATTTG GAGTAA
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Protein sequence | MDTAMNTKEP TQSYDKLTAH FQKISHFEHF SALGDWDQAA MMPLGGGSER GDAMAELALH IHSLKTAPEL GDNLAQASQE ALSPEQQANL REMQYQYQQA TLVPGELVQA KTKMAYQCEN AWREQRKNND WQGFKPNLKA VIALAREEAL IRAQALNISP YDALLDKFEP GMTTAKLEQT FGDLKTWLPS FIQDVLAKQA SEPKLTLNGP FEIKAQQALG QAVMAYLGFD FNHGRLDISS HPFCGGVPSD VRITTRYNEA DFSSAIMGIV HETGHARYEQ GLPKQWRGQP AGLARSMGVH ESQSLFCEMQ LGANPAFLRQ LQPLIKQHLG CEFSAQDLAR HYTRVNPGLI RVDADEVTYP CHILLRFEAE KAFIDGSLSV DDLPDFWSSQ MQQLLGINTD GNYRDGCMQD IHWAVGELGY FPSYTLGAMY AAQCRFALER SLGPIENLID NGQLSQVFDW LGTHIWSKGS LLTTDELIIQ ATGEPLNSQY LAKHLKQRYL E
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