Gene Shewmr4_2819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2819 
Symbol 
ID4253390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3372600 
End bp3374105 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content50% 
IMG OID638119454 
Productcarboxypeptidase Taq 
Protein accessionYP_734947 
Protein GI113971154 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2317] Zn-dependent carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCG CTATGAACAC CAAAGAACCT ACGCAAAGTT ACGATAAACT CACGGCCCAT 
TTCCAGAAAA TTTCACATTT TGAACATTTT AGTGCGCTTG GTGATTGGGA TCAGGCCGCC
ATGATGCCCC TCGGTGGCGG CAGCGAGCGT GGCGATGCGA TGGCAGAACT GGCGTTACAT
ATCCACAGCC TTAAAACGGC GCCAGAGCTT GGCGATAACC TCGCACAAGC CTCGCAAGAG
GCGCTGAGCC CAGAGCAACA GGCCAATCTG AGGGAAATGC AATATCAGTA TCAACAGGCG
ACCTTAGTGC CGGGTGAGCT AGTACAGGCC AAAACGAAAA TGGCCTACCA ATGTGAGAAT
GCCTGGCGCG AGCAACGCAA AAACAATGAT TGGCAAGGTT TTAAACCGAA TCTAAAAGCG
GTGATTGCCC TCGCGAGGGA AGAAGCCTTA ATTCGCGCGC AGGCCCTTAA CATCTCCCCC
TATGATGCCC TGCTCGATAA ATTTGAGCCC GGCATGACCA CGGCAAAGCT TGAGCAGACC
TTTGGTGACT TAAAAACGTG GTTACCCAGT TTTATCCAAG ATGTACTGGC AAAACAAGCC
AGTGAACCCA AGCTTACCCT TAACGGCCCC TTCGAAATCA AGGCACAGCA AGCCCTAGGC
CAAGCGGTGA TGGCCTATTT AGGGTTTGAT TTTAACCATG GCAGGCTCGA TATCAGCAGC
CACCCATTTT GTGGTGGAGT GCCAAGCGAT GTACGCATCA CGACGCGTTA TAATGAAGCC
GATTTTAGCA GTGCTATCAT GGGCATAGTG CATGAAACTG GCCACGCCCG TTATGAACAG
GGCTTACCGA AACAATGGCG CGGTCAGCCC GCAGGATTGG CTCGCTCCAT GGGCGTCCAT
GAGAGCCAAA GCTTATTTTG TGAAATGCAG CTCGGTGCCA ATCCCGCGTT TTTACGCCAA
TTACAACCAC TGATTAAACA GCATTTGGGC TGTGAGTTTA GCGCCCAAGA CTTGGCAAGA
CACTATACCC GCGTCAATCC CGGGCTTATC CGTGTCGATG CCGATGAAGT CACTTACCCT
TGCCATATTC TATTGCGCTT TGAAGCCGAA AAAGCCTTTA TCGACGGTAG CCTGAGTGTG
GATGATCTCC CTGATTTTTG GTCAAGCCAG ATGCAACAAC TGCTCGGGAT CAATACCGAT
GGAAACTATC GCGATGGTTG TATGCAGGAT ATCCATTGGG CCGTAGGTGA ATTGGGGTAT
TTTCCAAGTT ATACCTTAGG CGCCATGTAT GCCGCCCAAT GCCGTTTTGC GCTGGAGCGA
AGCTTAGGCC CGATTGAAAA CCTCATCGAT AATGGGCAGT TATCCCAAGT ATTTGACTGG
CTTGGCACTC ATATTTGGTC CAAAGGCTCA TTACTGACAA CGGATGAACT CATCATTCAA
GCCACAGGAG AGCCGCTCAA TAGCCAATAT CTAGCCAAAC ATTTGAAGCA ACGTTATTTG
GAGTAA
 
Protein sequence
MDTAMNTKEP TQSYDKLTAH FQKISHFEHF SALGDWDQAA MMPLGGGSER GDAMAELALH 
IHSLKTAPEL GDNLAQASQE ALSPEQQANL REMQYQYQQA TLVPGELVQA KTKMAYQCEN
AWREQRKNND WQGFKPNLKA VIALAREEAL IRAQALNISP YDALLDKFEP GMTTAKLEQT
FGDLKTWLPS FIQDVLAKQA SEPKLTLNGP FEIKAQQALG QAVMAYLGFD FNHGRLDISS
HPFCGGVPSD VRITTRYNEA DFSSAIMGIV HETGHARYEQ GLPKQWRGQP AGLARSMGVH
ESQSLFCEMQ LGANPAFLRQ LQPLIKQHLG CEFSAQDLAR HYTRVNPGLI RVDADEVTYP
CHILLRFEAE KAFIDGSLSV DDLPDFWSSQ MQQLLGINTD GNYRDGCMQD IHWAVGELGY
FPSYTLGAMY AAQCRFALER SLGPIENLID NGQLSQVFDW LGTHIWSKGS LLTTDELIIQ
ATGEPLNSQY LAKHLKQRYL E