| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2817 |
|---|
| Symbol | |
|---|
| ID | 4253388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3371222 |
|---|
| End bp | 3371857 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638119452 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734945 |
|---|
| Protein GI | 113971152 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGCGT TTTTAGTTGA ACAGCCTAAC CTACCTTACA CTATTGCCTT CGCCTGCGTG
CTTGTCCTTG GTGTGTTTGA AGCCTTAGCC CTAGTCATAG GGCTAAGCAT GATGAGTGCG
CTCGACCAAT GGGTGCCCGC CGATGTGGAT TATGATGCCG ATATTGGTGG TACTGGCCTG
ACGGGGATTG CGGGCTGGCT ATGTCTGAAT CGATTACCCT TACTTATCTG GTTTGTGCTG
GCACTGACCA GCTTTGCAAT AGTCGGTTAT ATTGCAAATT ACCTGAGCCT GCTATTCACG
GGCGTTTTGT TACCGCAACT CTTCACCTTA CCGATTGCTG TGGTTGGCAG TGCGTTTGCC
TGTCGCTATC TCGGGCGGAT CTTGGCCGAT TTACTCCCCA AAAATGAGTC CACCGCCATA
TCCCTTGATG ATTTAAGTGG TTATGTTGGT ACTATCACCT TAGGCTGCGC CATGAAGGGC
ATGCCTTCGG AAGCTGTGGT GCGCGATAAA CATCAACAAA AACATTATGT ATTAGTCGAA
CCCGAAACCT CGGGTATCGA GTTTGCCAGT GGCACGCAAG TGGTGCTGCT AAAACGAGAA
GGAAGAGTCT GGTCTGCGAC TCGCTTTGAT AATTAA
|
|---|
| Protein sequence | MWAFLVEQPN LPYTIAFACV LVLGVFEALA LVIGLSMMSA LDQWVPADVD YDADIGGTGL
TGIAGWLCLN RLPLLIWFVL ALTSFAIVGY IANYLSLLFT GVLLPQLFTL PIAVVGSAFA
CRYLGRILAD LLPKNESTAI SLDDLSGYVG TITLGCAMKG MPSEAVVRDK HQQKHYVLVE
PETSGIEFAS GTQVVLLKRE GRVWSATRFD N
|
|---|
| |